RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SNX32Q86XE0 403 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF100Q8IYN0 542 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 C10orf82Q8WW14 230 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 NINJ1Q92982 152 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 EVA1AQ9H8M9 152 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 C6orf203Q9P0P8 240 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 ITPR3Q14573 2671 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 TEP1Q99973 2627 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 RAI1Q7Z5J4 1906 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 LIPT2A6NK58 231 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 ELOA3DA6NLF2 546 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 DEFB108AA8MXU0 73 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF814B7Z6K7 855 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 FXYD1O00168 92 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 TPST1O60507 370 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 NPPAP01160 153 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 BNIP2Q12982 314 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 ELOA3BQ3SY89 546 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 C1orf140Q5VVS0 124 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 C6orf89Q6UWU4 347 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 Q6ZT83 130 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 LSRQ86X29 649 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 ELOA3Q8NG57 546 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 KISS1RQ969F8 398 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF775Q96BV0 537 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 PIK3IP1Q96FE7 263 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 SH3GL1Q99961 368 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 TAPBPLQ9BX59 468 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 HDHD5Q9BXW7 423 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 RSPO3Q9BXY4 272 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 TRIM2Q9C040 744 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 NOSIPQ9Y314 301 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 HIVEP1P15822 2718 aa15.28■□□□□ 0.04
CHMP1A-208ENST00000550102 A0A1B0GWA3 101 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 SIAH2O43255 324 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 RAMP1O60894 148 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 MFN2O95140 757 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 AHSA1O95433 338 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 CNOT4O95628 575 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 HTR2AP28223 471 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 CEACAM7Q14002 265 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 OR7A5Q15622 319 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 OTUD3Q5T2D3 398 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 SFRP5Q5T4F7 317 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 INTS11Q5TA45 600 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 PATL1Q86TB9 770 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 RANBP3LQ86VV4 465 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 CCDC103Q8IW40 242 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 LSMEM1Q8N8F7 131 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 PCYOX1LQ8NBM8 494 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 OR8J3Q8NGG0 315 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 OR52E4Q8NGH9 312 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 OR10A6Q8NH74 314 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 STK35Q8TDR2 534 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 DNAJA4Q8WW22 397 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 APH1AQ96BI3 265 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 S100PBPQ96BU1 408 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 LRRC58Q96CX6 371 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 LIME1Q9H400 295 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 C12orf10Q9HB07 376 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 PRSS50Q9UI38 385 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC9A8Q9Y2E8 581 aa15.27■□□□□ 0.04
CHMP1A-208ENST00000550102 ROS1P08922 2347 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 AQP7P3A6NL99 342 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 NPIPB7O75200 414 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ADAP00813 363 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 OPN1SWP03999 348 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 RAF1P04049 648 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 THBDP07204 575 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 PNMTP11086 282 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 COX5AP20674 150 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 DNASE1P24855 282 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 DMTNQ08495 405 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ITGADQ13349 1161 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 BEX5Q5H9J7 111 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 RABL3Q5HYI8 236 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ALG10BQ5I7T1 473 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 NANOGP8Q6NSW7 305 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 C5orf46Q6UWT4 87 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 CASP12Q6UXS9 341 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 USB1Q9BQ65 265 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 PLEKHF2Q9H8W4 249 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 NANOGQ9H9S0 305 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ADPRHL2Q9NX46 363 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 SELENONQ9NZV5 590 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 ARMCX1Q9P291 453 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 PLEKHA6Q9Y2H5 1048 aa15.26■□□□□ 0.03
CHMP1A-208ENST00000550102 PRRC2AP48634 2157 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 A0A1W2PPR1 153 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 MRPL33O75394 65 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 AKR7A3O95154 331 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 EDNRAP25101 427 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 ART1P52961 327 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 IST1P53990 364 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 NR1H2P55055 460 aa15.25■□□□□ 0.03
CHMP1A-208ENST00000550102 SLC17A1Q14916 467 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms