RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 MYL12AP19105 171 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 SDHBP21912 280 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 NR4A1P22736 598 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 GADD45AP24522 165 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 EVI2BP34910 448 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 GSSP48637 474 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 NCS1P62166 190 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 EFNB1P98172 346 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 ZNF117Q03924 483 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 MLLT11Q13015 90 aaPredicted RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 GINS1Q14691 196 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 TRIM16LQ309B1 348 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 ZNF730Q6ZMV8 503 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 MARCH3Q86UD3 253 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 RANBP3LQ86VV4 465 aaPredicted RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 RPS19BP1Q86WX3 136 aaKnown RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 RAB43Q86YS6 212 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 CENPSQ8N2Z9 138 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 SLC43A2Q8N370 569 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 NANOGP1Q8N7R0 232 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 OR5L2Q8NGL0 311 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 ABTB1Q969K4 478 aaPredicted RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 SLC35B4Q969S0 331 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 PRSS27Q9BQR3 290 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 RHNO1Q9BSD3 238 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 ZBTB20Q9HC78 741 aaPredicted RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 GALNT9Q9HCQ5 603 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 FGF20Q9NP95 211 aaPredicted RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 EXOSC3Q9NQT5 275 aaKnown RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 ICAM5Q9UMF0 924 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 EXOSC1Q9Y3B2 195 aaKnown RBP6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
HMGCS2-204ENST00000544913 PRRC2CQ9Y520 2896 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 IGLV3-32A0A0A0MS00 114 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A1W2PRS3 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 KIR3DP1A8MWS1 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 LOC110117498-PIK3R3F6TDL0 507 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 MYL12BO14950 172 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 PTHP01270 115 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 DBTP11182 482 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 FPR3P25089 353 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 ETV6P41212 452 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 NUDT6P53370 316 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 PSMD4P55036 377 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SOX8P57073 446 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 RGS8P57771 180 aaPredicted RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 LSM3P62310 102 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 OXA1LQ15070 435 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SNAPC1Q16533 368 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CRTC2Q53ET0 693 aaPredicted RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TMEM236Q5W0B7 351 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TMEM81Q6P7N7 255 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CDK20Q8IZL9 346 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SIRT6Q8N6T7 355 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TCEANCQ8N8B7 351 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 OR5M3Q8NGP4 307 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SNIP1Q8TAD8 396 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TMEM163Q8TC26 289 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TTC9Q92623 222 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 NPAS1Q99742 590 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 GPA33Q99795 319 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 COQ7Q99807 217 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 ZNF426Q9BUY5 554 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TAPBPLQ9BX59 468 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TSSK6Q9BXA6 273 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 HOXD1Q9GZZ0 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CDCP1Q9H5V8 836 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SP140LQ9H930 580 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CTPS2Q9NRF8 586 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 IL20Q9NYY1 176 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TVP23BQ9NYZ1 205 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TESQ9UGI8 421 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 SSR3Q9UNL2 185 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 YARS2Q9Y2Z4 477 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 MED12Q93074 2177 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 ITPR1Q14643 2758 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 URB1O60287 2271 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A087WUU8 490 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A0B4J2E0 115 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 A0A1B0GX12 115 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TMEM129A0AVI4 362 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CPSF4LA6NMK7 179 aaKnown RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 J3QRK9 145 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 KLF4O43474 513 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TLX2O43763 284 aaPredicted RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CSTAP01040 98 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 HSMCR30P0CW71 290 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 CCL3P10147 92 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 GAAP10253 952 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 IL12BP29460 328 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 IDUAP35475 653 aa6.37□□□□□ -1.39
HMGCS2-204ENST00000544913 PLA2G5P39877 138 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms