RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TMEM27Q9HBJ8 222 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 NDE1Q9NXR1 346 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 KLHL13Q9P2N7 655 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 IGHV3-15A0A0B4J1V0 119 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 ZNF814B7Z6K7 855 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 FTCDNL1E5RQL4 147 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 PRKD3O94806 890 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 CALB2P22676 271 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 CDH12P55289 794 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 SPATS1Q496A3 300 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 LRRC23Q53EV4 343 aaPredicted RBP17.04■□□□□ 0.32
DDX55-211ENST00000544429 ENTPD8Q5MY95 495 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 CBLL1Q75N03 491 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 CARM1Q86X55 608 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 RBM15BQ8NDT2 890 aaKnown RBP17.04■□□□□ 0.32
DDX55-211ENST00000544429 OR6K3Q8NGY3 331 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 PROX1Q92786 737 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 RNASE6Q93091 150 aaKnown RBP17.04■□□□□ 0.32
DDX55-211ENST00000544429 SLC47A1Q96FL8 570 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 ZNF426Q9BUY5 554 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 PLSCR4Q9NRQ2 329 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 RPS6KB2Q9UBS0 482 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 FOXD3Q9UJU5 478 aaPredicted RBP17.04■□□□□ 0.32
DDX55-211ENST00000544429 SLC9A8Q9Y2E8 581 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 SH3GLB1Q9Y371 365 aa17.04■□□□□ 0.32
DDX55-211ENST00000544429 ANKHD1Q8IWZ3 2542 aaKnown RBP17.03■□□□□ 0.32
DDX55-211ENST00000544429 ELOA3DA6NLF2 546 aaPredicted RBP17.03■□□□□ 0.32
DDX55-211ENST00000544429 ZNF716A6NP11 495 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 EIF1BO60739 113 aaKnown RBP17.03■□□□□ 0.32
DDX55-211ENST00000544429 TNFRSF1BP20333 461 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 IDUAP35475 653 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 P2RY4P51582 365 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 SLC16A1P53985 500 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 SLC35A1P78382 337 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 ELOA3BQ3SY89 546 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 C1orf140Q5VVS0 124 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 PAQR6Q6TCH4 344 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 C5orf46Q6UWT4 87 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 C16orf89Q6UX73 402 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 TRPM8Q7Z2W7 1104 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 CNEP1R1Q8N9A8 125 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 ELOA3Q8NG57 546 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 VANGL1Q8TAA9 524 aaPredicted RBP17.03■□□□□ 0.32
DDX55-211ENST00000544429 ADAMTS16Q8TE57 1224 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 CDRT15Q96T59 188 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 TACO1Q9BSH4 297 aaKnown RBP17.03■□□□□ 0.32
DDX55-211ENST00000544429 ADA2Q9NZK5 511 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 KLHL9Q9P2J3 617 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 CLEC4AQ9UMR7 237 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 EMC9Q9Y3B6 208 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 CENPEQ02224 2701 aa17.03■□□□□ 0.32
DDX55-211ENST00000544429 DCHS2Q6V1P9 2916 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 ZNF724A8MTY0 619 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 B2RBV5 119 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 EEF1E1-BLOC1S5C9J1V9 151 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 EEF1E1O43324 174 aaKnown RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 CHP2O43745 196 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 RAMP1O60894 148 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 GPIP06744 558 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 YES1P07947 543 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 FPR1P21462 350 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 SIRPAP78324 504 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 CEACAM7Q14002 265 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 SAMD4BQ5PRF9 694 aaKnown RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 PPP4R4Q6NUP7 873 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 ZNF474Q6S9Z5 364 aaPredicted RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 WDR88Q6ZMY6 472 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 TUSC5Q8IXB3 177 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 DMRTC2Q8IXT2 367 aaPredicted RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 DEFB107AQ8IZN7 70 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 RNF148Q8N7C7 305 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 MFSD8Q8NHS3 518 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 KTI12Q96EK9 354 aaPredicted RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 DNAJA3Q96EY1 480 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 TMEM43Q9BTV4 400 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 POLR2J2Q9GZM3 115 aaKnown RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 POLR2J3Q9H1A7 115 aaKnown RBP17.02■□□□□ 0.32
DDX55-211ENST00000544429 GORASP2Q9H8Y8 452 aa17.02■□□□□ 0.32
DDX55-211ENST00000544429 TRAPPC13A5PLN9 417 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 PLGP00747 810 aaPredicted RBP17.01■□□□□ 0.31
DDX55-211ENST00000544429 NCK1P16333 377 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 OR1E2P47887 323 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 OR2B6P58173 313 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 SORDQ00796 357 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 RASGEF1BQ0VAM2 473 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 ZNF787Q6DD87 383 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 VTCN1Q7Z7D3 282 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 FAM156AQ8NDB6 213 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 OR6S1Q8NH40 331 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 ZHX1-C8orf76Q96EF9 292 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 PRSS27Q9BQR3 290 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 C1orf21Q9H246 121 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 GALNT8Q9NY28 637 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 EGFL7Q9UHF1 273 aa17.01■□□□□ 0.31
DDX55-211ENST00000544429 AQP7P3A6NL99 342 aa17■□□□□ 0.31
DDX55-211ENST00000544429 CPSF4LA6NMK7 179 aaKnown RBP17■□□□□ 0.31
DDX55-211ENST00000544429 GSTA4O15217 222 aa17■□□□□ 0.31
DDX55-211ENST00000544429 SERPINA1P01009 418 aa17■□□□□ 0.31
DDX55-211ENST00000544429 CTBP2P56545 445 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms