RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KTI12Q96EK9 354 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PIP5K1AQ99755 562 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 VKORC1Q9BQB6 163 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TMEM43Q9BTV4 400 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CALHM2Q9HA72 323 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NMNAT1Q9HAN9 279 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TESMINQ9Y4I5 508 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CD8B2A6NJW9 211 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PRSS23O95084 383 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PMS2P2O95744 297 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IMPDH2P12268 514 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SLC35A1P78382 337 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PMPCAQ10713 525 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FGD3Q5JSP0 725 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PIWIL3Q7Z3Z3 882 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C10orf53Q8N6V4 93 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR52J3Q8NH60 311 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FNDC9Q8TBE3 224 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 HS6ST2Q96MM7 605 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CLCF1Q9UBD9 225 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TRAPPC4Q9Y296 219 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF175Q9Y473 711 aa12.98□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TRAV36DV7A0A075B6V5 113 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IGHV3-15A0A0B4J1V0 119 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR2T1O43869 369 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NPIPB7O75200 414 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 GADD45GO95257 159 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TGM6O95932 706 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IL2RAP01589 272 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FCGR2AP12318 317 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 HOXB6P17509 224 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FPR1P21462 350 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ENPP1P22413 925 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RRM2P31350 389 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MAGEA2P43356 314 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PER3P56645 1201 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NUP107P57740 925 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SMIM11AP58511 58 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CCNIQ14094 377 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 IQCCQ4KMZ1 466 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FAM69AQ5T7M9 428 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF730Q6ZMV8 503 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NCCRP1Q6ZVX7 275 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RRM2BQ7LG56 351 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ADGRE4PQ86SQ3 457 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PIK3C3Q8NEB9 887 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MFSD8Q8NHS3 518 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 WNT2BQ93097 391 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TAAR8Q969N4 342 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 UCN2Q96RP3 112 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TM9SF2Q99805 663 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CHID1Q9BWS9 393 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SLC19A3Q9BZV2 496 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 KLHL4Q9C0H6 718 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ANKRD19PQ9H560 264 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MAN2C1Q9NTJ4 1040 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C6orf203Q9P0P8 240 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SLC5A6Q9Y289 635 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NBASA2RRP1 2371 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MBD3L4A6NDZ8 208 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MBD3L3A6NE82 208 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MBD3L5A6NJ08 208 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 LIPT2A6NK58 231 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 GLI4P10075 376 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FUT4P22083 530 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CBLP22681 906 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 UGT2B15P54855 530 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 KPNB1Q14974 876 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MTFR2Q6P444 385 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FCRLAQ7L513 359 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MARVELD2Q8N4S9 558 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 C9orf106Q8NAJ2 232 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PFN4Q8NHR9 129 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MBD3L2Q8NHZ7 208 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ACOT11Q8WXI4 607 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NAA11Q9BSU3 229 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZNF426Q9BUY5 554 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-216ENST00000543995 MYO7BQ6PIF6 2116 aa12.96□□□□□ -0.34
TNFRSF1A-216ENST00000543995 A0A1W2PRQ8 180 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GNGT2O14610 69 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DNPH1O43598 174 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 EIF1BO60739 113 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FKBP6O75344 327 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AQP8O94778 261 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AKR7A3O95154 331 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PLGP00747 810 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CST1P01037 141 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms