RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TRAF3IP2O43734 574 aaPredicted RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 EIF4E2O60573 245 aaKnown RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 ZNF432O94892 652 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 KCNK2O95069 426 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 H6PDO95479 791 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 IGKV1D-16P01601 117 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 JUNP05412 331 aaKnown RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 NHLRC4P0CG21 123 aaPredicted RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 HSD3B1P14060 373 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 ZNF12P17014 697 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 TSPAN8P19075 237 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 HSD3B2P26439 372 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 SLC35A1P78382 337 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 NPRL3Q12980 569 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 QPRTQ15274 297 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 CD226Q15762 336 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 ZCCHC12Q6PEW1 402 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 AAED1Q7RTV5 226 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 GOLGA7Q7Z5G4 137 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 CMIPQ8IY22 773 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 GALNT4Q8N4A0 578 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 KLHL36Q8N4N3 616 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 SPICQ8N5J4 248 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 C1orf52Q8N6N3 182 aaKnown RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 COX18Q8N8Q8 333 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 GRK7Q8WTQ7 553 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 SELENOMQ8WWX9 145 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 LRTOMTQ8WZ04 291 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 CDKL2Q92772 493 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 ELP4Q96EB1 424 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 UBXN10Q96LJ8 280 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 B9D2Q9BPU9 175 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 SYT3Q9BQG1 590 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 MARCH7Q9H992 704 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 NPHS2Q9NP85 383 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 EQTNQ9NQ60 294 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 TNFRSF19Q9NS68 423 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 SLC6A13Q9NSD5 602 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 SLCO1C1Q9NYB5 712 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 VPS29Q9UBQ0 182 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 LEF1Q9UJU2 399 aaPredicted RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 TRAPPC4Q9Y296 219 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 CARD8Q9Y2G2 431 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 PCDHGB5Q9Y5G0 923 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 FLVCR1Q9Y5Y0 555 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 DSPPQ9NZW4 1301 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 PCDH7O60245 1069 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 NCR1O76036 304 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 WISP3O95389 354 aaPredicted RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 PLATP00750 562 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 CTAGE8P0CG41 777 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 NAT2P11245 290 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 DDCP20711 480 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 GPC1P35052 558 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 SEC24CP53992 1094 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 CCL8P80075 99 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 MERTKQ12866 999 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 PFKFB4Q16877 469 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 GGTA1PQ4G0N0 100 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 MSS51Q4VC12 460 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 SPIN4Q56A73 249 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 SGO1Q5FBB7 561 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 TRMT10BQ6PF06 316 aaKnown RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 C11orf88Q6PI97 169 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 CBLN3Q6UW01 205 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 Q6YL49 198 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 RAPH1Q70E73 1250 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 ISCA2Q86U28 154 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 CTAGE4Q8IX94 777 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 ANKK1Q8NFD2 765 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 RHEBL1Q8TAI7 183 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 BCL2L2Q92843 193 aaPredicted RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 KTI12Q96EK9 354 aaPredicted RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 AURKBQ96GD4 344 aaPredicted RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 AMDHD1Q96NU7 426 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 ATOH8Q96SQ7 321 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 SF3B5Q9BWJ5 86 aaKnown RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 NOL11Q9H8H0 719 aaKnown RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 SAP30LQ9HAJ7 183 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 HINT3Q9NQE9 182 aaKnown RBP8.03□□□□□ -1.12
YBX3-211ENST00000541351 DUSP13Q9UII6 198 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 PSAT1Q9Y617 370 aa8.03□□□□□ -1.12
YBX3-211ENST00000541351 ZNF264O43296 627 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 LGI1O95970 557 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 NTF4P34130 210 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 CAPZA2P47755 286 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 OR2B6P58173 313 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 POU6F2P78424 691 aaPredicted RBP8.02□□□□□ -1.13
YBX3-211ENST00000541351 ACSM2AQ08AH3 577 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 HERPUD1Q15011 391 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 TOMM34Q15785 309 aaPredicted RBP8.02□□□□□ -1.13
YBX3-211ENST00000541351 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 ESCO2Q56NI9 601 aa8.02□□□□□ -1.13
YBX3-211ENST00000541351 TTMPQ5BVD1 217 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms