RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TTMPQ5BVD1 217 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 WBP2NLQ6ICG8 309 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 PAQR6Q6TCH4 344 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 GOLGA6L1Q8N7Z2 621 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 FBXW5Q969U6 566 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 COX4I2Q96KJ9 171 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 EBF4Q9BQW3 602 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 BDH2Q9BUT1 245 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 BCL2L10Q9HD36 194 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 A4GALTQ9NPC4 353 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 ASB6Q9NWX5 421 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 SLC9A8Q9Y2E8 581 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 FAM171A2A8MVW0 826 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 IGHV3-9P01782 118 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 GPIP06744 558 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 IDUAP35475 653 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 RPS4XP62701 263 aaKnown RBP18.49■□□□□ 0.55
CHFR-217ENST00000540537 SLC17A1Q14916 467 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 ZNF672Q499Z4 452 aaPredicted RBP18.49■□□□□ 0.55
CHFR-217ENST00000540537 LRIF1Q5T3J3 769 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 BLOC1S3Q6QNY0 202 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 ATG4DQ86TL0 474 aaPredicted RBP18.49■□□□□ 0.55
CHFR-217ENST00000540537 FUNDC1Q8IVP5 155 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 CLIP4Q8N3C7 705 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 CADM2Q8N3J6 435 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 SMR3AQ99954 134 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 TMEM45AQ9NWC5 275 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 PARPBPQ9NWS1 579 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 TAS2R16Q9NYV7 291 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 LAMP3Q9UQV4 416 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 CHST2Q9Y4C5 530 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 FLVCR1Q9Y5Y0 555 aa18.49■□□□□ 0.55
CHFR-217ENST00000540537 NSD1Q96L73 2696 aaPredicted RBP18.49■□□□□ 0.55
CHFR-217ENST00000540537 LIPT2A6NK58 231 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 RAD51DO75771 328 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 NUDT7P0C024 238 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 DANCRP0C864 163 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 HOXB4P17483 251 aaPredicted RBP18.48■□□□□ 0.55
CHFR-217ENST00000540537 IRX1P78414 480 aaPredicted RBP18.48■□□□□ 0.55
CHFR-217ENST00000540537 CASP12Q6UXS9 341 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 BBS10Q8TAM1 723 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 DYDC1Q8WWB3 177 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 SLC35B4Q969S0 331 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 NPAP1Q9NZP6 1156 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 PLCE1Q9P212 2302 aa18.48■□□□□ 0.55
CHFR-217ENST00000540537 CIB4A0PJX0 185 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 CCT8L1PA6NM43 557 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 A8MVM7 634 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 H7C1Q1 480 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 PRG2P13727 222 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 NCF2P19878 526 aaPredicted RBP18.47■□□□□ 0.55
CHFR-217ENST00000540537 AQP5P55064 265 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 FAPQ12884 760 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 CEACAM7Q14002 265 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 ZNF311Q5JNZ3 666 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 OTUD3Q5T2D3 398 aaPredicted RBP18.47■□□□□ 0.55
CHFR-217ENST00000540537 OR7E24Q6IFN5 339 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 CLEC9AQ6UXN8 241 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 LSRQ86X29 649 aaPredicted RBP18.47■□□□□ 0.55
CHFR-217ENST00000540537 MSRB3Q8IXL7 192 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 KBTBD8Q8NFY9 601 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 SMAP2Q8WU79 429 aaPredicted RBP18.47■□□□□ 0.55
CHFR-217ENST00000540537 MAL2Q969L2 176 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 TMEM45BQ96B21 275 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 SPDL1Q96EA4 605 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 SF3B5Q9BWJ5 86 aaKnown RBP18.47■□□□□ 0.55
CHFR-217ENST00000540537 TRIM2Q9C040 744 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 PIF1Q9H611 641 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 SLC25A37Q9NYZ2 338 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 CCDC167Q9P0B6 97 aa18.47■□□□□ 0.55
CHFR-217ENST00000540537 AQP7P3A6NL99 342 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 C5orf58C9J3I9 102 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 OVOL3O00110 214 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 PDLIM1O00151 329 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 NR5A2O00482 541 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 ETS2P15036 469 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 PPIBP23284 216 aaKnown RBP18.46■□□□□ 0.55
CHFR-217ENST00000540537 ATP4BP51164 291 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 ATP5J2P56134 94 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 OR7A5Q15622 319 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 SERPINA11Q86U17 422 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 CIARTQ8N365 385 aaPredicted RBP18.46■□□□□ 0.55
CHFR-217ENST00000540537 TMEM99Q8N816 258 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 OR52E4Q8NGH9 312 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 NEUROG1Q92886 237 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 C3orf49Q96BT1 292 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 TAPBPLQ9BX59 468 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 SLC52A3Q9NQ40 469 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 DCTN4Q9UJW0 460 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 SLC25A15Q9Y619 301 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 GMEB1Q9Y692 573 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 TLN2Q9Y4G6 2542 aa18.46■□□□□ 0.55
CHFR-217ENST00000540537 A0A1W2PP18 115 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 TRIM64A6NGJ6 449 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 TRIM64BA6NI03 449 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 HMGB1P1B2RPK0 211 aaPredicted RBP18.45■□□□□ 0.54
CHFR-217ENST00000540537 TMEM229AB2RXF0 380 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 SHISA9B4DS77 424 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 FRS3O43559 492 aa18.45■□□□□ 0.54
CHFR-217ENST00000540537 NPIPB7O75200 414 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms