RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SLC25A53Q5H9E4 307 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 PDSS1Q5T2R2 415 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 AP1ARQ63HQ0 302 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 HBMQ6B0K9 141 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 ZNF474Q6S9Z5 364 aaPredicted RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 MSANTD1Q6ZTZ1 278 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 FKBP9P1Q75LS8 142 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 OLIG3Q7RTU3 272 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 TRIML2Q8N7C3 387 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 OR6K3Q8NGY3 331 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 RFWD2Q8NHY2 731 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 LINC01560Q8TB33 94 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 XAGE5Q8WWM1 108 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 NRGNQ92686 78 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 RAB8BQ92930 207 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 ROPN1LQ96C74 230 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 GMPPAQ96IJ6 420 aaPredicted RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 MARK4Q96L34 752 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 DACH2Q96NX9 599 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 INPP5KQ9BT40 448 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 POLDIP3Q9BY77 421 aaKnown RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 PRRG4Q9BZD6 226 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 LAT2Q9GZY6 243 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 OPN3Q9H1Y3 402 aaPredicted RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 SDR39U1Q9NRG7 319 aaPredicted RBP6.28□□□□□ -1.4
YBX3-206ENST00000536823 ZIM2Q9NZV7 527 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 KCNE5Q9UJ90 142 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 ITGB1BP2Q9UKP3 347 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 SLC35A3Q9Y2D2 325 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 TESMINQ9Y4I5 508 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 NF1P21359 2839 aa6.28□□□□□ -1.4
YBX3-206ENST00000536823 USF3Q68DE3 2245 aa6.27□□□□□ -1.4
YBX3-206ENST00000536823 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.41
YBX3-206ENST00000536823 GJE1A6NN92 205 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 HMGN4O00479 90 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ZNF195O14628 629 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 UBDO15205 165 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 EFNA2O43921 213 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 DIAPH2O60879 1101 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 SLC22A3O75751 556 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 UGT2B17O75795 530 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 PLGP00747 810 aaPredicted RBP6.27□□□□□ -1.41
YBX3-206ENST00000536823 C1QCP02747 245 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 OPN1LWP04000 364 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 HRGP04196 525 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 IL6P05231 212 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 UBTFL6P0CB48 400 aaPredicted RBP6.27□□□□□ -1.41
YBX3-206ENST00000536823 CDKN2CP42773 168 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 MAGEA8P43361 318 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CTBP2P56545 445 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CARD18P57730 90 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 HPCAP84074 193 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CBFBQ13951 182 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 MAPK14Q16539 360 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 TIGD2Q4W5G0 525 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 TTMPQ5BVD1 217 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 TYW3Q6IPR3 259 aaKnown RBP6.27□□□□□ -1.41
YBX3-206ENST00000536823 C3orf33Q6P1S2 294 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 SPNS3Q6ZMD2 512 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 RNF130Q86XS8 419 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CDC20BQ86Y33 519 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ZNF619Q8N2I2 560 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 RNF128Q8TEB7 428 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ZFP90Q8TF47 636 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ST8SIA1Q92185 356 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 OSTF1Q92882 214 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CPNE4Q96A23 557 aaPredicted RBP6.27□□□□□ -1.41
YBX3-206ENST00000536823 ZNF524Q96C55 264 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ATP6V1G3Q96LB4 118 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 C7orf26Q96N11 449 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 TRNT1Q96Q11 434 aaKnown RBP6.27□□□□□ -1.41
YBX3-206ENST00000536823 OR52B2Q96RD2 323 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 PANX1Q96RD7 426 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 SLC39A3Q9BRY0 314 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 SLC38A1Q9H2H9 487 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 COQ10BQ9H8M1 238 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 TIGARQ9NQ88 270 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 GLRX2Q9NS18 164 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ACER3Q9NUN7 267 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 NDRG3Q9UGV2 375 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 CLEC4AQ9UMR7 237 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 PROCRQ9UNN8 238 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 LIPT1Q9Y234 373 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 USH1CQ9Y6N9 552 aa6.27□□□□□ -1.41
YBX3-206ENST00000536823 ZANQ9Y493 2812 aa6.26□□□□□ -1.41
YBX3-206ENST00000536823 ZNF469Q96JG9 3925 aaPredicted RBP6.26□□□□□ -1.41
YBX3-206ENST00000536823 CSPG4Q6UVK1 2322 aa6.26□□□□□ -1.41
YBX3-206ENST00000536823 UQCRHLA0A096LP55 91 aa6.26□□□□□ -1.41
YBX3-206ENST00000536823 C16orf97H3BN30 126 aa6.26□□□□□ -1.41
YBX3-206ENST00000536823 RFXANKO14593 260 aa6.26□□□□□ -1.41
YBX3-206ENST00000536823 BCAS1O75363 584 aaPredicted RBP6.26□□□□□ -1.41
YBX3-206ENST00000536823 CYP7B1O75881 506 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms