RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF550Q7Z398 422 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 LSRQ86X29 649 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 TUSC5Q8IXB3 177 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 ZNF563Q8TA94 476 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SLC26A7Q8TE54 656 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 NINJ1Q92982 152 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 OR5B2Q96R09 309 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 C12orf49Q9H741 205 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 PLEKHF2Q9H8W4 249 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CTPS2Q9NRF8 586 aa15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 GMPR2Q9P2T1 348 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 RAI1Q7Z5J4 1906 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-209ENST00000536717 M0QX08 132 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 AP3D1O14617 1153 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CASKO14936 926 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 TCN1P20061 433 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 KLK2P20151 261 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 APOBEC1P41238 236 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 ZSWIM7Q19AV6 140 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SYT14P1Q58G82 188 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 MRPL2Q5T653 305 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SPNS3Q6ZMD2 512 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CCDC80Q76M96 950 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 GRINAQ7Z429 371 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 VRK2Q86Y07 508 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 ARMC8Q8IUR7 673 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 BHLHE22Q8NFJ8 381 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 THTPAQ9BU02 230 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 MED18Q9BUE0 208 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 KLHL4Q9C0H6 718 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SERINC1Q9NRX5 453 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CCM2LQ9NUG4 571 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 C6orf203Q9P0P8 240 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 KLHL13Q9P2N7 655 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CD300AQ9UGN4 299 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 ING1Q9UK53 422 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 ZNF443Q9Y2A4 671 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 CADP27708 2225 aa15.9■□□□□ 0.14
TNFRSF1A-209ENST00000536717 DEFB108AA8MXU0 73 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CXCR6O00574 342 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SMAD9O15198 467 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PRKD3O94806 890 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 IFNA14P01570 189 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PRKAR1BP31321 381 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 IDH2P48735 452 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DIO1P49895 249 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ART1P52961 327 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CEACAM7Q14002 265 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ANKRD34AQ69YU3 496 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 STAC2Q6ZMT1 411 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TMPPEQ6ZT21 453 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 NUFIP2Q7Z417 695 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ADGRG3Q86Y34 549 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SLC43A2Q8N370 569 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FAM156AQ8NDB6 213 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SLC25A43Q8WUT9 341 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RASSF5Q8WWW0 418 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ARL5BQ96KC2 179 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PSD2Q9BQI7 771 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GP6Q9HCN6 339 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CHRNA9Q9UGM1 479 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PLEKHA6Q9Y2H5 1048 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GCM2O75603 506 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DNAJC8O75937 253 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MFN2O95140 757 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CRYGSP22914 178 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 KDELR2P33947 212 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 LRRC23Q53EV4 343 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TMEM201Q5SNT2 666 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RNF220Q5VTB9 566 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PAMR1Q6UXH9 720 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TFAP2EQ6VUC0 442 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF836Q6ZNA1 936 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 BEND4Q6ZU67 534 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MCUR1Q96AQ8 359 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 BCO1Q9HAY6 547 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RLIMQ9NVW2 624 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF226Q9NYT6 803 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 EGFL7Q9UHF1 273 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SLC13A4Q9UKG4 626 aa15.89■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CDHR4A6H8M9 788 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CYTIPO60759 359 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 OPN1SWP03999 348 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 YES1P07947 543 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GGT1P19440 569 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DMTNQ08495 405 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 EPS8Q12929 822 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 BNIP2Q12982 314 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SMYD1Q8NB12 490 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TAMM41Q96BW9 452 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZC3HAV1LQ96H79 300 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 KLHL9Q9P2J3 617 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MAGEL2Q9UJ55 1249 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CHST2Q9Y4C5 530 aa15.88■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ACANP16112 2415 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SULT2B1O00204 365 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FAAHO00519 579 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PDE5AO76074 875 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 THBDP07204 575 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 422.4 ms