RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NECAB1Q8N987 351 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 OR4K14Q8NGD5 310 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 OR52I1Q8NGK6 324 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 FAM122AQ96E09 287 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 METTL7AQ9H8H3 244 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 BTNL2Q9UIR0 455 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 TRAF3IP3Q9Y228 551 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 TNRQ92752 1358 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 A0A0G2JRQ6 117 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 EPOPA6NHQ4 379 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 FAM47DPA6NHR8 397 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 TOM1O60784 492 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 RFC4P35249 363 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 BTDP43251 543 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 GSSP48637 474 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 GPM6AP51674 278 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ATP5IP56385 69 aaPredicted RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 SELENOTP62341 195 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 CSNK1G2P78368 415 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 CDK16Q00536 496 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 BST1Q10588 318 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 VGLL4Q14135 290 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 OXA1LQ15070 435 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 C9orf129Q5T035 196 aaKnown RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 GPRC6AQ5T6X5 926 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 PRAMEF5Q5TYX0 476 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 PRAMEF6Q5VXH4 476 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ENPP6Q6UWR7 440 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF571Q7Z3V5 609 aaPredicted RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 TRIM69Q86WT6 500 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 CDH26Q8IXH8 852 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 OR2AP1Q8NGE2 309 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 UFD1Q92890 307 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 PAGE5Q96GU1 130 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 TPD52L3Q96J77 140 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 B3GALT6Q96L58 329 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF641Q96N77 438 aaPredicted RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 EBF4Q9BQW3 602 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 NAT9Q9BTE0 207 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 POLR2J3Q9H1A7 115 aaKnown RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 AZI2Q9H6S1 392 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 FOLH1BQ9HBA9 442 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ETNK2Q9NVF9 386 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 MARCH5Q9NX47 278 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 ABCG2Q9UNQ0 655 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 UGT2A1Q9Y4X1 527 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 V9GY05 133 aa3.93□□□□□ -1.78
PRKDC-208ENST00000536710 CFAP65Q6ZU64 1925 aaKnown RBP3.93□□□□□ -1.78
PRKDC-208ENST00000536710 E7ENQ6 273 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 AP3B1O00203 1094 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 HAS3O00219 553 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 CIB2O75838 187 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 LGI1O95970 557 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 KLK3P07288 261 aaPredicted RBP3.92□□□□□ -1.78
PRKDC-208ENST00000536710 RPS2P15880 293 aaKnown RBP3.92□□□□□ -1.78
PRKDC-208ENST00000536710 TPMTP51580 245 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 STX17P56962 302 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 EGFEM1PQ0D2K5 195 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 BCL7AQ4VC05 210 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 CARD16Q5EG05 197 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 CTSL3PQ5NE16 218 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 Q6ZN92 141 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 CEND1Q8N111 149 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 C11orf42Q8N5U0 333 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 ACOT4Q8N9L9 421 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 BBS1Q8NFJ9 593 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 FAM110BQ8TC76 370 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 OR1E3Q8WZA6 343 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.92□□□□□ -1.78
PRKDC-208ENST00000536710 C16orf74Q96GX8 76 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 FMO2Q99518 471 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 MRPL45Q9BRJ2 306 aaKnown RBP3.92□□□□□ -1.78
PRKDC-208ENST00000536710 PKIBQ9C010 78 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 ACTR6Q9GZN1 396 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 PPA2Q9H2U2 334 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 SUDS3Q9H7L9 328 aaPredicted RBP3.92□□□□□ -1.78
PRKDC-208ENST00000536710 TMEM9Q9P0T7 183 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 SH3TC1Q8TE82 1336 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 RALGAPA1Q6GYQ0 2036 aa3.92□□□□□ -1.78
PRKDC-208ENST00000536710 XKRY2A2RUG3 117 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 A6NIZ1 184 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CCDC169A6NNP5 214 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 SNAPINO95295 136 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 LY6G6DO95868 133 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 IGHV3-48P01763 117 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 SLC2A3P11169 496 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ETS2P15036 469 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CD1CP29017 333 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 IL12AP29459 219 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 GDI1P31150 447 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 RGRP47804 291 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CRYBB1P53674 252 aaPredicted RBP3.91□□□□□ -1.78
PRKDC-208ENST00000536710 RAP1BP61224 184 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ARFRP1Q13795 201 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 SSX2Q16385 188 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 MICBQ29980 383 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 PARP15Q460N3 678 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms