RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 STAMBPO95630 424 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 TGM6O95932 706 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 CRHP06850 196 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 DIO1P49895 249 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 AGFG1P52594 562 aaKnown RBP12.11□□□□□ -0.47
RPAIN-205ENST00000536255 MYBPHQ13203 477 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
RPAIN-205ENST00000536255 IFI44LQ53G44 452 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 ENTPD8Q5MY95 495 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-205ENST00000536255 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 ADAMTS16Q8TE57 1224 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 SLC38A4Q969I6 547 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
RPAIN-205ENST00000536255 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 NSMCE2Q96MF7 247 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 RNF122Q9H9V4 155 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 GLRX2Q9NS18 164 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 DCAF13Q9NV06 445 aaKnown RBP12.11□□□□□ -0.47
RPAIN-205ENST00000536255 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 CPSF4LA6NMK7 179 aaKnown RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 TMEM229AB2RXF0 380 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 EEF1E1-BLOC1S5C9J1V9 151 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 ARPC2O15144 300 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 EEF1E1O43324 174 aaKnown RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 CHP2O43745 196 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 TPST2O60704 377 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 AHSA1O95433 338 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 PLGP00747 810 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 IFNW1P05000 195 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 GPIP06744 558 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 ENPP1P22413 925 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 IDUAP35475 653 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 OR1E2P47887 323 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 TAS2R41P59536 307 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 SLC35A1P78382 337 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 BNIP1Q12981 228 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 CEACAM7Q14002 265 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 RNPS1Q15287 305 aaKnown RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 NPTX1Q15818 432 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 FBXL19-AS1Q494R0 122 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 DEF8Q6ZN54 512 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 FCRLAQ7L513 359 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 OR4D11Q8NGI4 311 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 LRRC46Q96FV0 321 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-205ENST00000536255 MPP4Q96JB8 637 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 HSH2DQ96JZ2 352 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 EPYCQ99645 322 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 BTBD10Q9BSF8 475 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 PRR14Q9BWN1 585 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 SRXN1Q9BYN0 137 aa12.1□□□□□ -0.47
RPAIN-205ENST00000536255 A0A087WUJ7 227 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 OR2T1O43869 369 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 TNFSF13O75888 250 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 AQP8O94778 261 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 OR5F1O95221 314 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 SSTR2P30874 369 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 UQCRC1P31930 480 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 CDH12P55289 794 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 OR2B6P58173 313 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 CBX1P83916 185 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 MTX3Q5HYI7 312 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 VTCN1Q7Z7D3 282 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 RBM45Q8IUH3 476 aaKnown RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 RNF128Q8TEB7 428 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 POP5Q969H6 163 aaKnown RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 C14orf79Q96F83 325 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 TACO1Q9BSH4 297 aaKnown RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 NAA11Q9BSU3 229 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 THTPAQ9BU02 230 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 GP6Q9HCN6 339 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-205ENST00000536255 EMC9Q9Y3B6 208 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 HCFC1P51610 2035 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 FBN2P35556 2912 aa12.09□□□□□ -0.47
RPAIN-205ENST00000536255 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 NPIPB7O75200 414 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 PRKD3O94806 890 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 THRBP10828 461 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TNFRSF1BP20333 461 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 GTF2E2P29084 291 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms