RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647		A8MV72	311 aa	Predicted RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	AIM2	O14862	343 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	LSM1	O15116	133 aa	Known RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	EIF4E2	O60573	245 aa	Known RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ADAM11	O75078	769 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	BCKDHA	P12694	445 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	COX5A	P20674	150 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATP6V1C1	P21283	382 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ENPP1	P22413	925 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATP12A	P54707	1039 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	DSCR9	P59020	149 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ELF3	P78545	371 aa	Predicted RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	SELENBP1	Q13228	472 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	PPA1	Q15181	289 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	SMU1	Q2TAY7	513 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CHRFAM7A	Q494W8	412 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	AGAP6	Q5VW22	663 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CDC73	Q6P1J9	531 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	FKBP9P1	Q75LS8	142 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	NATD1	Q8N6N6	113 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	BVES	Q8NE79	360 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	TOR1AIP2	Q8NFQ8	470 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	KBTBD8	Q8NFY9	601 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	FBXO30	Q8TB52	745 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	NANOS1	Q8WY41	292 aa	Known RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CDS1	Q92903	461 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	MUCL1	Q96DR8	90 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	LRGUK	Q96M69	825 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	HS6ST2	Q96MM7	605 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	TSSK3	Q96PN8	268 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	RHNO1	Q9BSD3	238 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CADM1	Q9BY67	442 aa	Known RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ACTRT3	Q9BYD9	372 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CXorf36	Q9H7Y0	433 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	EFCAB1	Q9HAE3	211 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	YAE1D1	Q9NRH1	226 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMEM160	Q9NX00	188 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CCDC167	Q9P0B6	97 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	BAIAP2L1	Q9UHR4	511 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	CARD8	Q9Y2G2	431 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	DTNA	Q9Y4J8	743 aa		10.2	□□□□□ -0.78
CTNND1-238	ENST00000534647	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	BBIP1	A8MTZ0	92 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	OIP5	O43482	229 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	CYTIP	O60759	359 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	RAMP1	O60894	148 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	NDUFS7	O75251	213 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	NUDT14	O95848	222 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ALDOC	P09972	364 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	RPL3	P39023	403 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	CCT3	P49368	545 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	NUDT2	P50583	147 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC25A3	Q00325	362 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	EMX2	Q04743	252 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	LASP1	Q14847	261 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	PDK3	Q15120	406 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	TOMM34	Q15785	309 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ELOA3B	Q3SY89	546 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	PDCD4	Q53EL6	469 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	C6orf136	Q5SQH8	315 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	DCST2	Q5T1A1	773 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	AP1AR	Q63HQ0	302 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	SZRD1	Q7Z422	152 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATG4D	Q86TL0	474 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	PHC2	Q8IXK0	858 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF619	Q8N2I2	560 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ELOA3	Q8NG57	546 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR56A1	Q8NGH5	318 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR5W2	Q8NH69	310 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR5P2	Q8WZ92	322 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF524	Q96C55	264 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	RCN3	Q96D15	328 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZBTB18	Q99592	522 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	THTPA	Q9BU02	230 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	AIG1	Q9NVV5	245 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	GPATCH2	Q9NW75	528 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMEM45A	Q9NWC5	275 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	NOP53	Q9NZM5	478 aa	Known RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	GIMAP2	Q9UG22	337 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	GDF2	Q9UK05	429 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	MGAT4B	Q9UQ53	548 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	B3GALT5	Q9Y2C3	310 aa		10.19	□□□□□ -0.78
CTNND1-238	ENST00000534647	CAD	P27708	2225 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	IGKV3D-15	A0A087WSY6	115 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR5H1	A6NKK0	313 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	GTPBP1	O00178	669 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	NR5A2	O00482	541 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	ANGPT2	O15123	496 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	SCAMP2	O15127	329 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	SMAD9	O15198	467 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF264	O43296	627 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	FAM157C	P0CG43	387 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	GGT1	P19440	569 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC7A1	P30825	629 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	THBS2	P35442	1172 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	MRPL19	P49406	292 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	NME5	P56597	212 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms