RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TAF9	Q16594	264 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GTDC1	Q4AE62	458 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CARD16	Q5EG05	197 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BSPRY	Q5W0U4	402 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LEG1	Q6P5S2	330 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ABHD13	Q7L211	337 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FCRLA	Q7L513	359 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	UNC93A	Q86WB7	457 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	STH	Q8IWL8	128 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FBXW8	Q8N3Y1	598 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR11G2	Q8NGC1	345 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR10V1	Q8NGI7	309 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ADAMTS16	Q8TE57	1224 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLCO4A1	Q96BD0	722 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RUNDC3B	Q96NL0	473 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NAP1L3	Q99457	506 aa	Predicted RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DUSP16	Q9BY84	665 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	UBXN6	Q9BZV1	441 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC7A5P2	Q9GIP4	190 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CARD9	Q9H257	536 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	HSD3B7	Q9H2F3	369 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CDC42EP4	Q9H3Q1	356 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PARVG	Q9HBI0	331 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SYTL2	Q9HCH5	934 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SDF2L1	Q9HCN8	221 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ABCC13	Q9NSE7	274 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DDX28	Q9NUL7	540 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EXOC1	Q9NV70	894 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	HACD3	Q9P035	362 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	POMT2	Q9UKY4	750 aa		3.74	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PMS2P5	A8MQ11	134 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442		F5H5T6	163 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC28A1	O00337	649 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SYT7	O43581	403 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PRPSAP2	O60256	369 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SNAP91	O60641	907 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CYTIP	O60759	359 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CLN5	O75503	358 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF821	O75541	412 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CDC123	O75794	336 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OPN1MW	P04001	364 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SOD3	P08294	240 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OPN1MW2	P0DN77	364 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OPN1MW3	P0DN78	364 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SKIL	P12757	684 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MAPK3	P27361	379 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LOX	P28300	417 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SOX3	P41225	446 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CAPZB	P47756	277 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR3A2	P47893	321 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CNN1	P51911	297 aa	Known RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IRX1	P78414	480 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PHEX	P78562	749 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF33B	Q06732	778 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ELP6	Q0PNE2	266 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MSLN	Q13421	630 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GPR50	Q13585	617 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ITGA9	Q13797	1035 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GGTLC2	Q14390	218 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NECTIN1	Q15223	517 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LRRC37A5P	Q49AS3	106 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TMEM52B	Q4KMG9	183 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CMPK2	Q5EBM0	449 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RABGAP1L	Q5R372	815 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	C1orf189	Q5VU69	101 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC27A4	Q6P1M0	643 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CD164L2	Q6UWJ8	174 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	UNC5D	Q6UXZ4	953 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	B3GLCT	Q6Y288	498 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SCARA5	Q6ZMJ2	495 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BHLHA9	Q7RTU4	235 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ADAMTSL2	Q86TH1	951 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LACC1	Q8IV20	430 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TCEANC	Q8N8B7	351 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TMEM178A	Q8NBL3	297 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MDS2	Q8NDY4	140 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR52K2	Q8NGK3	314 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR4A16	Q8NH70	328 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TMEM186	Q96B77	213 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ULK4	Q96C45	1275 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BPIFA2	Q96DR5	249 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	C2orf48	Q96LS8	159 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NODAL	Q96S42	347 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SUCNR1	Q9BXA5	334 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RAB34	Q9BZG1	259 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ULBP1	Q9BZM6	244 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	XPO4	Q9C0E2	1151 aa	Known RBP	3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SH2D2A	Q9NP31	389 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EPHA6	Q9UF33	1036 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	HMGXB4	Q9UGU5	601 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	UBQLN2	Q9UHD9	624 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EXOC7	Q9UPT5	735 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SH3GLB1	Q9Y371	365 aa		3.73	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IGHV4-4	A0A075B6R2	117 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442		A0A087WZ39	114 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RNF103-CHMP3	A0A140T963	221 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF233	A6NK53	670 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442	YJEFN3	A6XGL0	299 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442	BLOC1S5-TXNDC5	H3BN57	136 aa		3.72	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CHUK	O15111	745 aa		3.72	□□□□□ -1.81

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