RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 ATG4DQ86TL0 474 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 LILRB1Q8NHL6 650 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 SMAP2Q8WU79 429 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 DYDC1Q8WWB3 177 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 GTF2H4Q92759 462 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 NEUROG1Q92886 237 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 GTPBP3Q969Y2 492 aaKnown RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 TRMT61AQ96FX7 289 aaKnown RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 SLC9A8Q9Y2E8 581 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 IFT52Q9Y366 437 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 CADP27708 2225 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 A0A1W2PP18 115 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 TRIM64A6NGJ6 449 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 TRIM64BA6NI03 449 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 THBS1P07996 1170 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 NTF4P34130 210 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 ACAA2P42765 397 aaKnown RBP13.62□□□□□ -0.23
CPSF1-211ENST00000533492 FADDQ13158 208 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 CEACAM7Q14002 265 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 RGNQ15493 299 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 OR7A5Q15622 319 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 KRTAP21-3Q3LHN1 58 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF311Q5JNZ3 666 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
CPSF1-211ENST00000533492 RNF220Q5VTB9 566 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 OR7E24Q6IFN5 339 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 PAQR6Q6TCH4 344 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 CLIP4Q8N3C7 705 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 GOLGA6L1Q8N7Z2 621 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 KBTBD8Q8NFY9 601 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 COX4I2Q96KJ9 171 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 ATP6V1G3Q96LB4 118 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 SPATA9Q9BWV2 254 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 TAPBPLQ9BX59 468 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 PAIP1Q9H074 479 aaKnown RBP13.62□□□□□ -0.23
CPSF1-211ENST00000533492 SLCO1B3Q9NPD5 702 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 CISD1Q9NZ45 108 aaKnown RBP13.62□□□□□ -0.23
CPSF1-211ENST00000533492 FLVCR1Q9Y5Y0 555 aa13.62□□□□□ -0.23
CPSF1-211ENST00000533492 A0A096LPI6 279 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 A8MVM7 634 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 ABCD4O14678 606 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 AKR7A3O95154 331 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 LY6G6DO95868 133 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 HEXAP06865 529 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 SOD3P08294 240 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 NUDT7P0C024 238 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 IDH3AP50213 366 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 BNIP2Q12982 314 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 SLC17A1Q14916 467 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 TMEM225Q6GV28 225 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 KLHL17Q6TDP4 642 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 SEZ6L2Q6UXD5 910 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 TMEM99Q8N816 258 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 RADILQ96JH8 1075 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 CCDC28BQ9BUN5 200 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 TRIM2Q9C040 744 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 ALG2Q9H553 416 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 FAIMQ9NVQ4 179 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 CCDC167Q9P0B6 97 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 MALT1Q9UDY8 824 aa13.61□□□□□ -0.23
CPSF1-211ENST00000533492 LIPT2A6NK58 231 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 DANCRP0C864 163 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 PRG2P13727 222 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 MRPL19P49406 292 aaKnown RBP13.6□□□□□ -0.23
CPSF1-211ENST00000533492 AQP5P55064 265 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 C9orf135Q5VTT2 229 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 PRAMEF8Q5VWM4 474 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 PRAMEF7Q5VXH5 474 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 TMEM108Q6UXF1 575 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 SERPINA11Q86U17 422 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 GPAT4Q86UL3 456 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 LSRQ86X29 649 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-211ENST00000533492 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-211ENST00000533492 OR52E4Q8NGH9 312 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 BBS10Q8TAM1 723 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 MAL2Q969L2 176 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 SPDL1Q96EA4 605 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 MUS81Q96NY9 551 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 EBF4Q9BQW3 602 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
CPSF1-211ENST00000533492 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 ADPRHL2Q9NX46 363 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 MGAT4BQ9UQ53 548 aa13.6□□□□□ -0.23
CPSF1-211ENST00000533492 A0A1W2PR80 420 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 OVOL3O00110 214 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 NR5A2O00482 541 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 BMP2P12643 396 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 PPIBP23284 216 aaKnown RBP13.59□□□□□ -0.23
CPSF1-211ENST00000533492 PTAFRP25105 342 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 CDKN1AP38936 164 aa13.59□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF83P51522 516 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms