RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 NKIRAS2Q9NYR9 191 aa15.29■□□□□ 0.04
CTSB-228ENST00000533455 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
CTSB-228ENST00000533455 KIF25Q9UIL4 384 aa15.29■□□□□ 0.04
CTSB-228ENST00000533455 FLVCR2Q9UPI3 526 aa15.29■□□□□ 0.04
CTSB-228ENST00000533455 SCN2AQ99250 2005 aa15.29■□□□□ 0.04
CTSB-228ENST00000533455 TICRRQ7Z2Z1 1910 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 MYO7AQ13402 2215 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 GXYLT2A0PJZ3 443 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 URADA6NGE7 173 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 AIPO00170 330 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 KRT33AO76009 404 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 C4BPBP20851 252 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 PRKACBP22694 351 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 VEGFCP49767 419 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 RPS21P63220 83 aaKnown RBP15.28■□□□□ 0.04
CTSB-228ENST00000533455 ID2Q02363 134 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 ILF3Q12906 894 aaKnown RBP eCLIP15.28■□□□□ 0.045e-7■■□□□ 12.5
CTSB-228ENST00000533455 BAMBIQ13145 260 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 ZSWIM7Q19AV6 140 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 SLC51BQ86UW2 128 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 OR52I2Q8NH67 350 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 MRPL48Q96GC5 212 aaKnown RBP15.28■□□□□ 0.04
CTSB-228ENST00000533455 UTP23Q9BRU9 249 aaKnown RBP15.28■□□□□ 0.04
CTSB-228ENST00000533455 NOX4Q9NPH5 578 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 KLHL9Q9P2J3 617 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 NCDNQ9UBB6 729 aa15.28■□□□□ 0.04
CTSB-228ENST00000533455 LRRC72A6NJI9 287 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 IFITM5A6NNB3 132 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 PIN1P1O15428 100 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SNAPC5O75971 98 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 NDUFB2O95178 105 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 UBL4AP11441 157 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 CPN1P15169 458 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 HIST1H1CP16403 213 aaKnown RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 SRMP19623 302 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 ZNF10P21506 573 aaPredicted RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 DIO1P49895 249 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 TSPAN5P62079 268 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 MRPS10P82664 201 aaKnown RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 TAGLNQ01995 201 aaKnown RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 LGALS3BPQ08380 585 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 MGAT2Q10469 447 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SGCGQ13326 291 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 PRICKLE4Q2TBC4 344 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 TCTE1Q5JU00 501 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 VITQ6UXI7 678 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 LINC00114Q6XXX2 140 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 GPAT4Q86UL3 456 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 OR4K13Q8NH42 304 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 DOK4Q8TEW6 326 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SNX33Q8WV41 574 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 HOXB13Q92826 284 aaPredicted RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 SMARCD2Q92925 531 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SLC22A18Q96BI1 424 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 MSANTD3Q96H12 275 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 DDOQ99489 341 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 SMAD5Q99717 465 aaKnown RBP15.27■□□□□ 0.04
CTSB-228ENST00000533455 APOOQ9BUR5 198 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 TRIM2Q9C040 744 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 IL21RQ9HBE5 538 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 GNG8Q9UK08 70 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
CTSB-228ENST00000533455 A0A1W2PPL8 197 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 TNFSF14O43557 240 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 FGF17O60258 216 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 GIPP09681 153 aaPredicted RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 MNDAP41218 407 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 NAA10P41227 235 aaPredicted RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 ACAA2P42765 397 aaKnown RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 RPL6Q02878 288 aaKnown RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 OPCMLQ14982 345 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 GLDNQ6ZMI3 551 aaPredicted RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 ZAR1Q86SH2 424 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 BPHLQ86WA6 291 aaPredicted RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 WBP1Q96G27 269 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 PDCD1LG2Q9BQ51 273 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 MRI1Q9BV20 369 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 RBCK1Q9BYM8 510 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 CRISPLD2Q9H0B8 497 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 ZNF224Q9NZL3 707 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 MRPL15Q9P015 296 aaKnown RBP15.27■□□□□ 0.03
CTSB-228ENST00000533455 PIPOXQ9P0Z9 390 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 COPS3Q9UNS2 423 aa15.27■□□□□ 0.03
CTSB-228ENST00000533455 ANKRD20A5PA0PJZ0 165 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 SYNDIG1LA6NDD5 238 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 CTSVO60911 334 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 NKX2-2O95096 273 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 KAT7O95251 611 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 GUSBP08236 651 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 GABRA3P34903 492 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 WASP42768 502 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 SOX9P48436 509 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 MECP2P51608 486 aaKnown RBP15.26■□□□□ 0.03
CTSB-228ENST00000533455 PPP2CBP62714 309 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 PPP2CAP67775 309 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 ENPP2Q13822 863 aa15.26■□□□□ 0.03
CTSB-228ENST00000533455 SLC35D3Q5M8T2 416 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms