RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FPR1P21462 350 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 IDUAP35475 653 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 OR3A2P47893 321 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 H3F3AP84243 136 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 DMTNQ08495 405 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 POU4F3Q15319 338 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 C22orf34Q6ZV56 151 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 ARMC8Q8IUR7 673 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 CCDC103Q8IW40 242 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 SLC30A8Q8IWU4 369 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 GABRG1Q8N1C3 465 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 OR10A6Q8NH74 314 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 LRRC58Q96CX6 371 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 RPS6KB2Q9UBS0 482 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 GPR52Q9Y2T5 361 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 MAP1AP78559 2803 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 LIPT2A6NK58 231 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 TMEM229AB2RXF0 380 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 SLC22A2O15244 555 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 RAMP1O60894 148 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 GCM2O75603 506 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-210ENST00000532935 MFN2O95140 757 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 NPPAP01160 153 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 GPIP06744 558 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 PPP3CBP16298 524 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
CPSF1-210ENST00000532935 CRYGSP22914 178 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 HTR2AP28223 471 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 DNAJA1P31689 397 aaKnown RBP13.63□□□□□ -0.23
CPSF1-210ENST00000532935 PCGF2P35227 344 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 GZMMP51124 257 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 SLC16A1P53985 500 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 CEACAM7Q14002 265 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 OR7A5Q15622 319 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 GALNT5Q7Z7M9 940 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 LSMEM1Q8N8F7 131 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 OR8J3Q8NGG0 315 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 ELAC2Q9BQ52 826 aaKnown RBP13.63□□□□□ -0.23
CPSF1-210ENST00000532935 ACTR6Q9GZN1 396 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 FAM107BQ9H098 131 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 C6orf203Q9P0P8 240 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-210ENST00000532935 ARMCX1Q9P291 453 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 SLC13A4Q9UKG4 626 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 ITGB1BP2Q9UKP3 347 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
CPSF1-210ENST00000532935 A0A1B0GWA3 101 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 GPR171O14626 319 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 SIAH2O43255 324 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 NPIPB7O75200 414 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 ADAP00813 363 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 THBDP07204 575 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 EDNRAP25101 427 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
CPSF1-210ENST00000532935 RABL3Q5HYI8 236 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 SFRP5Q5T4F7 317 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 C1orf140Q5VVS0 124 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 C6orf89Q6UWU4 347 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 Q6ZT83 130 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
CPSF1-210ENST00000532935 YTHDF3Q7Z739 585 aaKnown RBP13.62□□□□□ -0.23
CPSF1-210ENST00000532935 ZNF100Q8IYN0 542 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 PCYOX1LQ8NBM8 494 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 STEAP2Q8NFT2 490 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 OR52E4Q8NGH9 312 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 STK35Q8TDR2 534 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 PRR14Q9BWN1 585 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 OR10A4Q9H209 315 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 LIME1Q9H400 295 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 PIF1Q9H611 641 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 EVA1AQ9H8M9 152 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 C12orf10Q9HB07 376 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 GID8Q9NWU2 228 aa13.62□□□□□ -0.23
CPSF1-210ENST00000532935 TESQ9UGI8 421 aaKnown RBP13.62□□□□□ -0.23
CPSF1-210ENST00000532935 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
CPSF1-210ENST00000532935 ELOA3DA6NLF2 546 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-210ENST00000532935 M0QX08 132 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 CCDC22O60826 627 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 AKR7A3O95154 331 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 LGI1O95970 557 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 OPN1SWP03999 348 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 NCALDP61601 193 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 P2RY6Q15077 328 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 TSC22D1Q15714 1073 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 DUSP7Q16829 419 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 VMACQ2NL98 169 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 ELOA3BQ3SY89 546 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 OTUD3Q5T2D3 398 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms