RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 GDF7Q7Z4P5 450 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TSEN54Q7Z6J9 526 aaKnown RBP10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 DNAJC9Q8WXX5 260 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SLC41A3Q96GZ6 507 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 VCX3AQ9NNX9 186 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RHCGQ9UBD6 479 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RIMS3Q9UJD0 308 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 A0A087WUJ7 227 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 A8MVM7 634 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 hCG_2039718K7EN88 272 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SULT2B1O00204 365 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 AQP8O94778 261 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 DIRAS1O95057 198 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LYPD3O95274 346 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PNMTP11086 282 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 ENPP1P22413 925 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 ERFP50548 548 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 VLDLRP98155 873 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TMEM211Q6ICI0 200 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LCN8Q6JVE9 175 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TMEM154Q6P9G4 183 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 P4HA3Q7Z4N8 544 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CCDC71Q8IV32 467 aaPredicted RBP10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 NAXEQ8NCW5 288 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RND1Q92730 232 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 WNT2BQ93097 391 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 KTI12Q96EK9 354 aaPredicted RBP10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SEPHS2Q99611 448 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PRRG4Q9BZD6 226 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MUC13Q9H3R2 512 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 A4GNTQ9UNA3 340 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 POMPQ9Y244 141 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 HDGFL3Q9Y3E1 203 aa10.68□□□□□ -0.7
TRAF3IP2-212ENST00000532708 IGKV1D-42A0A075B6H8 117 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MBD3L4A6NDZ8 208 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MBD3L3A6NE82 208 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MBD3L5A6NJ08 208 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 FFAR1O14842 300 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CHP2O43745 196 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SYNGR4O95473 234 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 FKBP2P26885 142 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RPS5P46782 204 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MAP2K6P52564 334 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 AGFG1P52594 562 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 OR2B6P58173 313 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RAC3P60763 192 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 C1orf140Q5VVS0 124 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LINC00114Q6XXX2 140 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 NKAIN4Q8IVV8 208 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 GCNT2Q8N0V5 402 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MBD3L2Q8NHZ7 208 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 INTS12Q96CB8 462 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 C7orf34Q96L11 122 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LRGUKQ96M69 825 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 UCN2Q96RP3 112 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 DCLRE1BQ9H816 532 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 C12orf10Q9HB07 376 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TIGARQ9NQ88 270 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 NDUFAF4Q9P032 175 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 Q9UFV3 132 aa10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MCTS1Q9ULC4 181 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 NCOA6Q14686 2063 aaPredicted RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 UTP20O75691 2785 aaKnown RBP10.67□□□□□ -0.7
TRAF3IP2-212ENST00000532708 NPIPB7O75200 414 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 OR5F1O95221 314 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 STAMBPO95630 424 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LDLRP01130 860 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 IL2RAP01589 272 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 FPR1P21462 350 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CBLP22681 906 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TIMP3P35625 211 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PER3P56645 1201 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 TRAP1Q12931 704 aaKnown RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 FOXF2Q12947 444 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 OR7A5Q15622 319 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 STK35Q8TDR2 534 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CPNE4Q96A23 557 aaPredicted RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SLC25A36Q96CQ1 311 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PRSS27Q9BQR3 290 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 POTEKPQ9BYX7 375 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 CLEC4AQ9UMR7 237 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 RNF6Q9Y252 685 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 ZNF175Q9Y473 711 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 ENPP4Q9Y6X5 453 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 SPTBN1Q01082 2364 aaKnown RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MAGEA13PA6NCF6 341 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 KPNA4O00629 521 aaPredicted RBP10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 PMS2P2O95744 297 aa10.66□□□□□ -0.7
TRAF3IP2-212ENST00000532708 MT-ND1P03886 318 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms