RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RNF130Q86XS8 419 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 C17orf78Q8N4C9 275 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 C1orf162Q8NEQ5 155 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 TESCQ96BS2 214 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 FBXO17Q96EF6 278 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 ZIM3Q96PE6 472 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 NAA11Q9BSU3 229 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC38A1Q9H2H9 487 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 PARPBPQ9NWS1 579 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 TMEM160Q9NX00 188 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 MOKQ9UQ07 419 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 KLF11O14901 512 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 ZNF208O43345 1280 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 EIF1BO60739 113 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 NME5P56597 212 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 MST1LQ2TV78 715 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 FAM174BQ3ZCQ3 159 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 HIKESHIQ53FT3 197 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 OTUD3Q5T2D3 398 aaPredicted RBP16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 TMEM99Q8N816 258 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 VPS37AQ8NEZ2 397 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 PROX1Q92786 737 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 ZNF385AQ96PM9 386 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 SHARPINQ9H0F6 387 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 PMF1-BGLAPU3KQ54 211 aa16.1■□□□□ 0.17
SSSCA1-206ENST00000531405 AGAP5A6NIR3 686 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 AKR7A3O95154 331 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 F12P00748 615 aaPredicted RBP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 CSF3P09919 207 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 BMP4P12644 408 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 IGFBP5P24593 272 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 MPGP29372 298 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC1A3P43003 542 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 PRPS1P60891 318 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 ABCE1P61221 599 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 VSNL1P62760 191 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 TGFBR3Q03167 851 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 CEACAM7Q14002 265 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 GGTLC2Q14390 218 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 PAQR6Q6TCH4 344 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 OR9K2Q8NGE7 335 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 WDR60Q8WVS4 1066 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 TEX37Q96LM6 180 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 SORCS2Q96PQ0 1159 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 TRNT1Q96Q11 434 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 ROPN1BQ9BZX4 212 aaPredicted RBP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 CHODLQ9H9P2 273 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 ROPN1Q9HAT0 212 aaPredicted RBP16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 LPAR3Q9UBY5 353 aa16.09■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC35F4A4IF30 521 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 E9PBE3 544 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 LMX1BO60663 402 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 SERPINE1P05121 402 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 MYZAPP0CAP1 466 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 S100A3P33764 101 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 CDKN2CP42773 168 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 LGALS3BPQ08380 585 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 EPS8Q12929 822 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 OR7A5Q15622 319 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 SWI5Q1ZZU3 235 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 COX20Q5RI15 118 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 MRPL2Q5T653 305 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 KLHL24Q6TFL4 600 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 AAED1Q7RTV5 226 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 CMIPQ8IY22 773 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 PNPT1Q8TCS8 783 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 PMM1Q92871 262 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 TMEM45BQ96B21 275 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 C3orf49Q96BT1 292 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 CCDC115Q96NT0 180 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 SORT1Q99523 831 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 NUF2Q9BZD4 464 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.16
SSSCA1-206ENST00000531405 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 CFAP73A6NFT4 308 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 CCDC154A6NI56 674 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 LIPT2A6NK58 231 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 VWC2LB2RUY7 222 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 WNT11O96014 354 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 GSNP06396 782 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 GKN3PP0CG01 181 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 IL7RP16871 459 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 LBPP18428 481 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 PDLIM4P50479 330 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 RPL14P50914 215 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 UFM1P61960 85 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 BNIP2Q12982 314 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 CARTPTQ16568 116 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 DPY19L1Q2PZI1 675 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 LRRC74BQ6ZQY2 392 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 GPAT4Q86UL3 456 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 AURKBQ96GD4 344 aaPredicted RBP16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 PRR14Q9BWN1 585 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 RLIMQ9NVW2 624 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms