RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 PBX4Q9BYU1 374 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 TCEAL2Q9H3H9 227 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 LRRN3Q9H3W5 708 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 FAM60AQ9NP50 221 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 EMC7Q9NPA0 242 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 MKKSQ9NPJ1 570 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 NRIP3Q9NQ35 241 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 SLCO1C1Q9NYB5 712 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 MRPL39Q9NYK5 338 aaKnown RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 STMN3Q9NZ72 180 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 COPZ2Q9P299 210 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 TEKT2Q9UIF3 430 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 GNG8Q9UK08 70 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 SPATA2Q9UM82 520 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 CAMK2AQ9UQM7 478 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 AK6Q9Y3D8 172 aaKnown RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 TGFBR3LH3BV60 316 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 EDNRAP25101 427 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 AKT2P31751 481 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 PBX2P40425 430 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 TPMTP51580 245 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 GPR143P51810 404 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 LGALS3BPQ08380 585 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 SRSF5Q13243 272 aaKnown RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 ZSWIM7Q19AV6 140 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 CD276Q5ZPR3 534 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 BAIAP2L2Q6UXY1 529 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 NPSR1Q6W5P4 371 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 TMEM184AQ6ZMB5 413 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 DPY19L2P2Q6ZN68 376 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 ZNF761Q86XN6 746 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-228ENST00000524023 ARHGEF39Q8N4T4 335 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 NPEPL1Q8NDH3 523 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 SLC37A2Q8TED4 501 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 OR2M2Q96R28 347 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 DDOQ99489 341 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 PDCD1LG2Q9BQ51 273 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 LMAN2LQ9H0V9 348 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 OR51J1Q9H342 316 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 NCDNQ9UBB6 729 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 ING4Q9UNL4 249 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 COPS3Q9UNS2 423 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 EML5Q05BV3 1969 aa10.16□□□□□ -0.78
HDAC9-228ENST00000524023 SPTBP11277 2137 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 A0A087WUJ7 227 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 EPOPA6NHQ4 379 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 IMPA2O14732 288 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 FOXS1O43638 330 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 GSTZ1O43708 216 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 SELENOFO60613 162 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 TNFP01375 233 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 CELA2BP08218 269 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ANKRD34CP0C6C1 535 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ST6GAL1P15907 406 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 RPL4P36578 427 aaKnown RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 PSMB10P40306 273 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 CCR6P51684 374 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 C19orf57Q0VDD7 668 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ANGPT1Q15389 498 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 CLPPQ16740 277 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 NDUFAF6Q330K2 333 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 HSD17B12Q53GQ0 312 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 PRSS45Q7RTY3 260 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 SLC22A18ASQ8N1D0 253 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 OR13H1Q8NG92 308 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 OR51Q1Q8NH59 317 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 LGALS14Q8TCE9 139 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ADAMTS14Q8WXS8 1223 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 RBM18Q96H35 190 aaKnown RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 SPACA7Q96KW9 195 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 NMNAT3Q96T66 252 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 C7orf50Q9BRJ6 194 aaKnown RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ORAI3Q9BRQ5 295 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 RANBP3Q9H6Z4 567 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ZFP64Q9NPA5 681 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 SLC23A1Q9UHI7 598 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 ZNF222Q9UK12 451 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 PCDHGA9Q9Y5G4 932 aaKnown RBP10.15□□□□□ -0.78
HDAC9-228ENST00000524023 MPDZO75970 2070 aa10.15□□□□□ -0.78
HDAC9-228ENST00000524023 OR6C68A6NDL8 312 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 OR5K3A6NET4 321 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 TRABD2BA6NFA1 517 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 EFCAB7A8K855 629 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 ARPC3O15145 178 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 CTDSPLO15194 276 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 GPRIN2O60269 458 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 SPI1P17947 270 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 STX4Q12846 297 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 KLF9Q13886 244 aaPredicted RBP10.15□□□□□ -0.79
HDAC9-228ENST00000524023 GXYLT1Q4G148 440 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 UBE2NLQ5JXB2 153 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 SLC35D3Q5M8T2 416 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 OOSP2Q86WS3 158 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 CMIPQ8IY22 773 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF671Q8TAW3 534 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 ZPLD1Q8TCW7 415 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 HSPA12BQ96MM6 686 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms