RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 IL32P24001 234 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ARRB2P32121 409 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 BSGP35613 385 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 HSPA7P48741 367 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 HNMTP50135 292 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 EMDP50402 254 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PDLIM4P50479 330 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 RPL14P50914 215 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ALDH18A1P54886 795 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 RPS3AP61247 264 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NHLH2Q02577 135 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 TGFBIQ15582 683 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 TSNQ15631 228 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 SGCBQ16585 318 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ZSCAN26Q16670 478 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PRICKLE4Q2TBC4 344 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 GALNTL6Q49A17 601 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 UNC50Q53HI1 259 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ARL13AQ5H913 290 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF678Q5SXM1 525 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 SULT1C3Q6IMI6 304 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NPSR1Q6W5P4 371 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 RNF165Q6ZSG1 346 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 BHLHA15Q7RTS1 189 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 LAS2Q8IYD9 372 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 SPATA6LQ8N4H0 392 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 GBP7Q8N8V2 638 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CCDC63Q8NA47 563 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PDPRQ8NCN5 879 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 OR4K17Q8NGC6 315 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 OR10D3Q8NH80 312 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 UBTD2Q8WUN7 234 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 C10orf82Q8WW14 230 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 TMCO6Q96DC7 493 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 BTBD9Q96Q07 612 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CCT7Q99832 543 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PIMREGQ9BSJ6 248 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 EFCAB11Q9BUY7 163 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 MECRQ9BV79 373 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ALG9Q9H6U8 611 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ANKRA2Q9H9E1 313 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NGBQ9NPG2 151 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 DNAJC11Q9NVH1 559 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NUDT4Q9NZJ9 180 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 MAT2BQ9NZL9 334 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CPSF2Q9P2I0 782 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CHST2Q9Y4C5 530 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 SNX8Q9Y5X2 465 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 USH1CQ9Y6N9 552 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CLGNO14967 610 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 HDAC3O15379 428 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 FADS1O60427 444 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 REM1O75628 298 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CLDN9O95484 217 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 GBAP04062 536 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 RPS17P08708 135 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 FAM58BPP0C7Q3 252 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CT45A8P0DMV1 189 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CT45A9P0DMV2 189 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 PCNAP12004 261 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 NEFHP12036 1026 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CPMP14384 443 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 DRD5P21918 477 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 TLX1P31314 330 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 PPICP45877 212 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 FABP6P51161 128 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 XKP51811 444 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CDH15P55291 814 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CHIT1Q13231 466 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 PPA1Q15181 289 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 LTB4RQ15722 352 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 TBCCQ15814 346 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 TRMT12Q53H54 448 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CT45A2Q5DJT8 189 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 SH2D4BQ5SQS7 431 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 OR52E8Q6IFG1 317 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 EPGNQ6UW88 154 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 TUSC5Q8IXB3 177 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 FBXL14Q8N1E6 418 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 TCAIMQ8N3R3 496 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 ZDHHC22Q8N966 263 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 OR7G3Q8NG95 312 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 OR4N2Q8NGD1 307 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 OR52B6Q8NGF0 335 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 OR52R1Q8NGF1 315 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 HUS1BQ8NHY5 278 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 ABHD3Q8WU67 409 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 RGMAQ96B86 450 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 C1GALT1C1Q96EU7 318 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 CMTM7Q96FZ5 175 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 MAELQ96JY0 434 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 DCLRE1CQ96SD1 692 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 KLHDC3Q9BQ90 382 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 RBM4Q9BWF3 364 aaKnown RBP5.77□□□□□ -1.49
SDCBP-210ENST00000522843 PRRG4Q9BZD6 226 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 MYLK2Q9H1R3 596 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 PRDM13Q9H4Q3 707 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 GSTO2Q9H4Y5 243 aa5.77□□□□□ -1.49
SDCBP-210ENST00000522843 DDX31Q9H8H2 851 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms