RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 IDUAP35475 653 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 NRF1Q16656 503 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 ZSWIM7Q19AV6 140 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 GTF2IRD2BQ6EKJ0 949 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 GTF2IRD2Q86UP8 949 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 CXorf67Q86X51 503 aaPredicted RBP15.84■□□□□ 0.13
CLK4-211ENST00000522556 GABRG1Q8N1C3 465 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 OR52E4Q8NGH9 312 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 RP9Q8TA86 221 aaKnown RBP15.84■□□□□ 0.13
CLK4-211ENST00000522556 VANGL1Q8TAA9 524 aaPredicted RBP15.84■□□□□ 0.13
CLK4-211ENST00000522556 SLC35B4Q969S0 331 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 RASSF1Q9NS23 344 aa15.84■□□□□ 0.13
CLK4-211ENST00000522556 C6orf203Q9P0P8 240 aaPredicted RBP15.84■□□□□ 0.13
CLK4-211ENST00000522556 IGKV3D-15A0A087WSY6 115 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 PRORSD1PA6NEY8 169 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 C16orf97H3BN30 126 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 CCDC22O60826 627 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 SERPINB7O75635 380 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 LGI1O95970 557 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 IGHV3-9P01782 118 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 CLK1P49759 484 aaKnown RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 P2RY4P51582 365 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 DAZAP2Q15038 168 aaPredicted RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 C1orf140Q5VVS0 124 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 C6orf89Q6UWU4 347 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 TMEM99Q8N816 258 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 PCYOX1LQ8NBM8 494 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 OR6T1Q8NGN1 323 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 KTI12Q96EK9 354 aaPredicted RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 ECSITQ9BQ95 431 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 POLDIP3Q9BY77 421 aaKnown RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 CLEC4MQ9H2X3 399 aaPredicted RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 GP6Q9HCN6 339 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 MRGBPQ9NV56 204 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 ADPRHL2Q9NX46 363 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 ELOVL5Q9NYP7 299 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 TESQ9UGI8 421 aaKnown RBP15.83■□□□□ 0.12
CLK4-211ENST00000522556 TRAPPC4Q9Y296 219 aa15.83■□□□□ 0.12
CLK4-211ENST00000522556 AKAP6Q13023 2319 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 ZNF724A8MTY0 619 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 A8MVM7 634 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 DEFB108AA8MXU0 73 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 FAM220BPB1ANY3 271 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 NME4O00746 187 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 HRGP04196 525 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 THY1P04216 161 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 PEX19P40855 299 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 RPS5P46782 204 aaKnown RBP15.82■□□□□ 0.12
CLK4-211ENST00000522556 OR3A2P47893 321 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 FOXG1P55316 489 aaPredicted RBP15.82■□□□□ 0.12
CLK4-211ENST00000522556 SLC35A1P78382 337 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 OR1Q1Q15612 314 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 ALG10BQ5I7T1 473 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 OTUD3Q5T2D3 398 aaPredicted RBP15.82■□□□□ 0.12
CLK4-211ENST00000522556 C8orf82Q6P1X6 216 aaPredicted RBP15.82■□□□□ 0.12
CLK4-211ENST00000522556 WDR88Q6ZMY6 472 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 CPLX4Q7Z7G2 160 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 CDC20BQ86Y33 519 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 SLC15A3Q8IY34 581 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 LSMEM1Q8N8F7 131 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 PIGXQ8TBF5 258 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 ZHX1-C8orf76Q96EF9 292 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 DACH2Q96NX9 599 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 MED18Q9BUE0 208 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 POTEKPQ9BYX7 375 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 SLC24A3Q9HC58 644 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 GID8Q9NWU2 228 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 ABCA4P78363 2273 aa15.82■□□□□ 0.12
CLK4-211ENST00000522556 A0A0B4J2E0 115 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 A0A1B0GX12 115 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 ELOA3DA6NLF2 546 aaPredicted RBP15.81■□□□□ 0.12
CLK4-211ENST00000522556 FTCDNL1E5RQL4 147 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 DNPH1O43598 174 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 SHOX2O60902 331 aaPredicted RBP15.81■□□□□ 0.12
CLK4-211ENST00000522556 LYPD3O95274 346 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 ADAP00813 363 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 NPPAP01160 153 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 CBLP22681 906 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 NUDT2P50583 147 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 SLC7A2P52569 658 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 SLC16A1P53985 500 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 NCALDP61601 193 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 ELOA3BQ3SY89 546 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 PAQR6Q6TCH4 344 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 BEND4Q6ZU67 534 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 CCDC80Q76M96 950 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 GALNT5Q7Z7M9 940 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 PATL1Q86TB9 770 aaKnown RBP15.81■□□□□ 0.12
CLK4-211ENST00000522556 CDH24Q86UP0 819 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 ELOA3Q8NG57 546 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 ZNF385AQ96PM9 386 aaKnown RBP15.81■□□□□ 0.12
CLK4-211ENST00000522556 HS3ST6Q96QI5 342 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 MCHR1Q99705 422 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 NSRP1Q9H0G5 558 aaKnown RBP15.81■□□□□ 0.12
CLK4-211ENST00000522556 RPS6KB2Q9UBS0 482 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 SLC13A4Q9UKG4 626 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 FLVCR1Q9Y5Y0 555 aa15.81■□□□□ 0.12
CLK4-211ENST00000522556 AQP7P3A6NL99 342 aa15.8■□□□□ 0.12
CLK4-211ENST00000522556 CPSF4LA6NMK7 179 aaKnown RBP15.8■□□□□ 0.12
CLK4-211ENST00000522556 GPIP06744 558 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms