RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 C9orf135Q5VTT2 229 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MEDAGQ5VYS4 303 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ELP2Q6IA86 826 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MFSD12Q6NUT3 480 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 FBXL22Q6P050 247 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 FAM199XQ6PEV8 388 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 BTNL8Q6UX41 500 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PLXDC2Q6UX71 529 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 C3P1Q6ZMU1 363 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 GCNT7Q6ZNI0 430 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ACOT7LQ6ZUV0 252 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 FCRLAQ7L513 359 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SSX7Q7RTT5 188 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 TRMT1LQ7Z2T5 733 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 TMED4Q7Z7H5 227 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RBM23Q86U06 439 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ITIH5Q86UX2 942 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 DHFR2Q86XF0 187 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 CACUL1Q86Y37 369 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PHF13Q86YI8 300 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MARCH9Q86YJ5 346 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 NAXDQ8IW45 347 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 FAM71AQ8IYT1 594 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RYBPQ8N488 228 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 HORMAD2Q8N7B1 307 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ATP6V0D2Q8N8Y2 350 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF738Q8NE65 137 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 DDHD1Q8NEL9 900 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PXT1Q8NFP0 134 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 OR51D1Q8NGF3 324 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 OR4A4PQ8NGN8 299 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 OR6N2Q8NGY6 317 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 OR5AK3PQ8NH89 298 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PIGXQ8TBF5 258 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 WDR20Q8TBZ3 569 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 WFIKKN2Q8TEU8 576 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 TMEM170AQ8WVE7 144 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 APH1BQ8WW43 257 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ADAMTS14Q8WXS8 1223 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RPL3LQ92901 407 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 HIST1H2ACQ93077 130 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PIGTQ969N2 578 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 IGSF8Q969P0 613 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PPWD1Q96BP3 646 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RAB39BQ96DA2 213 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RTP4Q96DX8 246 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SGTBQ96EQ0 304 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SCRN2Q96FV2 425 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 NSL1Q96IY1 281 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF597Q96LX8 424 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF285Q96NJ3 590 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF385AQ96PM9 386 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 IL4I1Q96RQ9 567 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 LGMNQ99538 433 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 WDR77Q9BQA1 342 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 AIF1LQ9BQI0 150 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 CCDC3Q9BQI4 270 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 KIFC1Q9BW19 673 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 DUSP16Q9BY84 665 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MRPS26Q9BYN8 205 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 HOXD1Q9GZZ0 328 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PCBD2Q9H0N5 130 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PORCNQ9H237 461 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SYT4Q9H2B2 425 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PPP1R3EQ9H7J1 279 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 C10orf88Q9H8K7 445 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MARCH7Q9H992 704 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ACTR5Q9H9F9 607 aaPredicted RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RAVER2Q9HCJ3 691 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 POLD4Q9HCU8 107 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ABCB9Q9NP78 766 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 MYNNQ9NPC7 610 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SIRT7Q9NRC8 400 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PLEKHJ1Q9NW61 149 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 C1orf109Q9NX04 203 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 TMEM9Q9P0T7 183 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ATP10DQ9P241 1426 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 EPHA6Q9UF33 1036 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 SMPXQ9UHP9 88 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZDHHC2Q9UIJ5 367 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZNF346Q9UL40 294 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 DIMT1Q9UNQ2 313 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 PDE10AQ9Y233 779 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ACOT9Q9Y305 439 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 CLIC4Q9Y696 253 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 CDH10Q9Y6N8 788 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ZMYM6O95789 1325 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 NRCAMQ92823 1304 aa2.38□□□□□ -2.03
PABPC1-211ENST00000519596 ATXN2Q99700 1313 aaKnown RBP2.38□□□□□ -2.03
PABPC1-211ENST00000519596 RFX7Q2KHR2 1363 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 SNED1Q8TER0 1413 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 A0A1B0GVT2 93 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 A0A1W2PRF3 423 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 A0A1W2PRM7 423 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 PSMB11A5LHX3 300 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 TMEM8BA6NDV4 472 aa2.37□□□□□ -2.03
PABPC1-211ENST00000519596 OR5K3A6NET4 321 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms