RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 ZP4Q12836 540 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 SNTB2Q13425 540 aaKnown RBP9.03□□□□□ -0.96
CLDND1-231ENST00000515620 C3orf36Q3SXR2 165 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 SLC9B1Q4ZJI4 515 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 KRT80Q6KB66 452 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 ZDHHC24Q6UX98 284 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
CLDND1-231ENST00000515620 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 SIGLECL1Q8N7X8 197 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 NANPQ8TBE9 248 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 RDH5Q92781 318 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 YIPF5Q969M3 257 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 TMEM45BQ96B21 275 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 BOD1Q96IK1 185 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 ZNF385AQ96PM9 386 aaKnown RBP9.03□□□□□ -0.96
CLDND1-231ENST00000515620 CCT7Q99832 543 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 NTN4Q9HB63 628 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 RRAGDQ9NQL2 400 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-231ENST00000515620 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 ZDHHC2Q9UIJ5 367 aa9.03□□□□□ -0.96
CLDND1-231ENST00000515620 FAF1Q9UNN5 650 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-231ENST00000515620 DNAJC9-AS1A6NH13 148 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 TRIM49D1C9J1S8 452 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PIP5K1BO14986 540 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PLPP2O43688 288 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 SYNGR3O43761 229 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 EIF1BO60739 113 aaKnown RBP9.02□□□□□ -0.97
CLDND1-231ENST00000515620 TBX19O60806 448 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 CRCPO75575 148 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ALX3O95076 343 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 IGKV3-15P01624 115 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 KRT16P08779 473 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ANPEPP15144 967 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 SDC1P18827 310 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PAX7P23759 505 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 FPR2P25090 351 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 RYKP34925 604 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PHBP35232 272 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ALDH3B1P43353 468 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 SLC35A1P78382 337 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 IL13RA1P78552 427 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 NPRL3Q12980 569 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PDE7AQ13946 482 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 DAG1Q14118 895 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 GPR68Q15743 365 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 SPDYE7PQ495Y7 208 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 DCAF12L2Q5VW00 463 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ACSM5Q6NUN0 579 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 OLIG3Q7RTU3 272 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 GRINAQ7Z429 371 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 RIBC1Q8N443 379 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-231ENST00000515620 CCNYL1Q8N7R7 359 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ZIC4Q8N9L1 334 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 OR9K2Q8NGE7 335 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 OR56A1Q8NGH5 318 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 OR5D16Q8NGK9 328 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 BCL2L2Q92843 193 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-231ENST00000515620 L3HYPDHQ96EM0 354 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 PAFAH2Q99487 392 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 NAA11Q9BSU3 229 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-231ENST00000515620 NMUR2Q9GZQ4 415 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 GSTO2Q9H4Y5 243 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 ZNF665Q9H7R5 613 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 GPATCH2Q9NW75 528 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 REV1Q9UBZ9 1251 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 BAIAP2L1Q9UHR4 511 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 KCNE5Q9UJ90 142 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 TRAPPC4Q9Y296 219 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 CMAHPQ9Y471 501 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 SAR1BQ9Y6B6 198 aa9.02□□□□□ -0.97
CLDND1-231ENST00000515620 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 J3QLI3 93 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 BCAS1O75363 584 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 IMPDH2P12268 514 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 PRTN3P24158 256 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 ATP5F1P24539 256 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 CCT3P49368 545 aaKnown RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 CLK1P49759 484 aaKnown RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 SERPINB9P50453 376 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 PRKAA2P54646 552 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 TMEM33P57088 247 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 POU3F1Q03052 451 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 MAD2L1BPQ15013 274 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 KIAA0040Q15053 153 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 ZNF141Q15928 474 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 OCLNQ16625 522 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 OTUD3Q5T2D3 398 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 PAQR6Q6TCH4 344 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 EIF3MQ7L2H7 374 aaKnown RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 GPAT4Q86UL3 456 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 ADGRG3Q86Y34 549 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 GSPT2Q8IYD1 628 aaKnown RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 FAM169BQ8N8A8 192 aa9.01□□□□□ -0.97
CLDND1-231ENST00000515620 TAF15Q92804 592 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 DVL3Q92997 716 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-231ENST00000515620 OR7D2Q96RA2 312 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms