RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RUNX3Q13761 415 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 KIAA0141Q14154 515 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 FAM69BQ5VUD6 431 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 OR10K2Q6IF99 312 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 TOX2Q96NM4 488 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 TGM5O43548 720 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 ARSAP15289 507 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 OMGP23515 440 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 FLI1Q01543 452 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CST9LP1Q5W188 147 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SBSNQ6UWP8 590 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CMIPQ8IY22 773 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CHTF18Q8WVB6 975 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 TMEM40Q8WWA1 233 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 C14orf79Q96F83 325 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SORCS2Q96PQ0 1159 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SERINC2Q96SA4 455 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CTRCQ99895 268 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 NPIPB15A6NHN6 443 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 H3BML4 177 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 PTGESO14684 152 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 SLC6A8P48029 635 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 PDZK1IP1Q13113 114 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RTL6Q6ICC9 239 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 HORMAD2Q8N7B1 307 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 OR6T1Q8NGN1 323 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RSC1A1Q92681 617 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 ELOVL3Q9HB03 270 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 NCDNQ9UBB6 729 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 SLC22A7Q9Y694 548 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 HIDE1A8MVS5 230 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 UBL4AP11441 157 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 IDUAP35475 653 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 PIGAP37287 484 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 TAS2R46P59540 309 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 ARSJQ5FYB0 599 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 NLGN4XQ8N0W4 816 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 ACOT4Q8N9L9 421 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 SFXN2Q96NB2 322 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 NRIP3Q9NQ35 241 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 SLC6A14Q9UN76 642 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 DIMT1Q9UNQ2 313 aaKnown RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 CAMK2AQ9UQM7 478 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 OR2A25A4D2G3 310 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 ADAM12O43184 909 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 CSO75390 466 aaKnown RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 OR8G3PP0DMU2 310 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 LCTLQ6UWM7 567 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 DDOQ99489 341 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 ZFYVE21Q9BQ24 234 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-214ENST00000515035 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 MED17Q9NVC6 651 aa12.4□□□□□ -0.42
TCOF1-214ENST00000515035 TRABD2BA6NFA1 517 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 YY2O15391 372 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 SERPINA2P20848 420 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 CD70P32970 193 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF140P52738 457 aaPredicted RBP12.4□□□□□ -0.43
TCOF1-214ENST00000515035 ARHGAP19Q14CB8 494 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 CHST14Q8NCH0 376 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 GPR26Q8NDV2 337 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 OR10Z1Q8NGY1 313 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 MITD1Q8WV92 249 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 TAAR8Q969N4 342 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 PIGMQ9H3S5 423 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 OCEL1Q9H607 264 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 B4GALT7Q9UBV7 327 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.43
TCOF1-214ENST00000515035 RGPD2P0DJD1 1756 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 M0QZQ0 153 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF852Q6ZMS4 543 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 MAVSQ7Z434 540 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 TCEAL8Q8IYN2 117 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 IL1F10Q8WWZ1 152 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 OR52A5Q9H2C5 316 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 SEMA4GQ9NTN9 838 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 DBHP09172 617 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 BMP1P13497 986 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 BTG1P62324 171 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 SIRPAP78324 504 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 TLE4Q04727 773 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF425Q6IV72 752 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ABHD4Q8TB40 342 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF582Q96NG8 517 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ALOXE3Q9BYJ1 711 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms