RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 CST6Q15828 149 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 GAB4Q2WGN9 574 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 KIAA1211LQ6NV74 962 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 C10orf53Q8N6V4 93 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 PXT1Q8NFP0 134 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 BRIX1Q8TDN6 353 aaKnown RBP8.91□□□□□ -0.98
VCAN-210ENST00000513960 WNT2BQ93097 391 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 MRPS30Q9NP92 439 aaKnown RBP8.91□□□□□ -0.98
VCAN-210ENST00000513960 ADAP2Q9NPF8 381 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 MBNL1Q9NR56 388 aaKnown RBP8.91□□□□□ -0.98
VCAN-210ENST00000513960 CAMK2AQ9UQM7 478 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 FCMRO60667 390 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 PRAF2O60831 178 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 GTF2F2P13984 249 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 CENPAP49450 140 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 TAS2R38P59533 333 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 PRR5P85299 388 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 FLI1Q01543 452 aaPredicted RBP8.91□□□□□ -0.98
VCAN-210ENST00000513960 TNFRSF17Q02223 184 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 BAMBIQ13145 260 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 RUNX3Q13761 415 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 CRMP1Q14194 572 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 TMEM255AQ5JRV8 349 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 VITQ6UXI7 678 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 RNF44Q7L0R7 432 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 TMEM17Q86X19 198 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 OR4N5Q8IXE1 308 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 LINC01555Q8NAE3 123 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 SDR9C7Q8NEX9 313 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 NUP43Q8NFH3 380 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 OR9A2Q8NGT5 310 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 PFN4Q8NHR9 129 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 PHOSPHO2Q8TCD6 241 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 SLITRK2Q9H156 845 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 MTIF3Q9H2K0 278 aaKnown RBP8.91□□□□□ -0.98
VCAN-210ENST00000513960 TCF7L1Q9HCS4 588 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 NDOR1Q9UHB4 597 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 STON1Q9Y6Q2 735 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 LRRK1Q38SD2 2015 aa8.91□□□□□ -0.98
VCAN-210ENST00000513960 A0A1W2PPV9 198 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 A0A1W2PS29 197 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 GPR89AB7ZAQ6 455 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 AIPO00170 330 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 CDC42EP2O14613 210 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 SGCEO43556 437 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 RLN2P04090 185 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 MAS1P04201 325 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 ATP1B1P05026 303 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 S100A6P06703 90 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 GPR89BP0CG08 455 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 DRD3P35462 400 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 FGL1Q08830 312 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 TMEM35AQ53FP2 167 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 NHLRC3Q5JS37 347 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 PDSS1Q5T2R2 415 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 RGS7BPQ6MZT1 257 aaPredicted RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 TMPRSS12Q86WS5 348 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 HERVK_113Q902F9 699 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 DVL3Q92997 716 aaPredicted RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 AMDHD1Q96NU7 426 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 RAB11FIP5Q9BXF6 653 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 SHARPINQ9H0F6 387 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 FN3KQ9H479 309 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 LHX9Q9NQ69 397 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 ZMAT5Q9UDW3 170 aaKnown RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 WDR45Q9Y484 360 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 A0A1W2PP55 124 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 OR14I1A6ND48 311 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 LRIT2A6NDA9 550 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 POU2F2P09086 479 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 MYOGP15173 224 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 ZNF3P17036 446 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 GJA4P35212 333 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 FAUP35544 74 aaKnown RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 CAPZA2P47755 286 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 MMP15P51511 669 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 LUMP51884 338 aaPredicted RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 GAS1P54826 345 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 DLX5P56178 289 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 GPM6BQ13491 265 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 AGERQ15109 404 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 RPE65Q16518 533 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 FAM69AQ5T7M9 428 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 ZNF620Q6ZNG0 422 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 NDUFAF7Q7L592 441 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 GDF7Q7Z4P5 450 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 TPRA1Q86W33 373 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 IL17RCQ8NAC3 791 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 DNAAF1Q8NEP3 725 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 NKX3-1Q99801 234 aaPredicted RBP8.9□□□□□ -0.98
VCAN-210ENST00000513960 NOX4Q9NPH5 578 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 IKZF2Q9UKS7 526 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 PLEKHA6Q9Y2H5 1048 aa8.9□□□□□ -0.98
VCAN-210ENST00000513960 SLC22A31A6NKX4 558 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 OR2AT4A6NND4 320 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 GPR31O00270 319 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 FARS2O95363 451 aaKnown RBP8.9□□□□□ -0.99
VCAN-210ENST00000513960 EPXP11678 715 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms