RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LIN52Q52LA3 116 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CLEC12AQ5QGZ9 265 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 HES5Q5TA89 166 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RNF220Q5VTB9 566 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PGBD5Q8N414 524 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 KBTBD8Q8NFY9 601 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DNAJC9Q8WXX5 260 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RAB8BQ92930 207 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TMBIM1Q969X1 311 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NXNL1Q96CM4 212 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CMTM3Q96MX0 182 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 F2RL3Q96RI0 385 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ATF6BQ99941 703 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MAPKAP1Q9BPZ7 522 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35A5Q9BS91 424 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C1QTNF2Q9BXJ5 285 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POLR2J3Q9H1A7 115 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NARFLQ9H6Q4 476 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNT2Q9NY97 397 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PLEK2Q9NYT0 353 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TAS2R10Q9NYW0 307 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 HAO1Q9UJM8 370 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 YARS2Q9Y2Z4 477 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF337Q9Y3M9 751 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FAM208BQ5VWN6 2430 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 IGLV3-10A0A075B6K4 115 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF25A6NGN4 478 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TSPAN2O60636 221 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CLPTM1O96005 669 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DHRS4L1P0CG22 281 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DEFA4P12838 97 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MAGP20916 626 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DRD3P35462 400 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 GPR143P51810 404 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 AKR1C2P52895 323 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 PSME3P61289 254 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 PCBD1P61457 104 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SNRPD2P62316 118 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ARF6P62330 175 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SLC34A1Q06495 639 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 HNF4GQ14541 408 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ARHGAP19Q14CB8 494 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 Q3ZCU0 254 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 RAB6CQ53S08 254 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 PLA2G2CQ5R387 149 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 OR52E8Q6IFG1 317 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CLEC2AQ6UVW9 174 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CAMKMTQ7Z624 323 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CUZD1Q86UP6 607 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 REXO1L1PQ8IX06 675 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 NAGSQ8N159 534 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf52Q8N6N3 182 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 OR7A2PQ8NGA2 310 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MITD1Q8WV92 249 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM171Q8WVE6 324 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35B4Q969S0 331 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF347Q96SE7 839 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 RAB6CQ9H0N0 254 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 C19orf12Q9NSK7 152 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CTSFQ9UBX1 484 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF222Q9UK12 451 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SPO11Q9Y5K1 396 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ROS1P08922 2347 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF106Q9H2Y7 1883 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 LOC390937A0A1W2PQ73 354 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 NKX6-3A6NJ46 265 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DBX1A6NMT0 343 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM229AB2RXF0 380 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 K7ENP7 123 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 M0R3H8 397 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SHOXO15266 292 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 APOL3O95236 402 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM11P17152 192 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 F2RP25116 425 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DCTP40126 519 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 VHLP40337 213 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MARCKSL1P49006 195 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 RAB13P51153 203 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CDH12P55289 794 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 RNASE12Q5GAN4 147 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 FAM209BQ5JX69 171 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 FAM182AQ5T1J6 154 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 METTL11BQ5VVY1 283 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 INO80CQ6PI98 192 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CD300LGQ6UXG3 332 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SMIM15Q7Z3B0 74 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MMP21Q8N119 569 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ASCC1Q8N9N2 400 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MORN4Q8NDC4 146 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 OR6N2Q8NGY6 317 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 BBS10Q8TAM1 723 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TWIST2Q8WVJ9 160 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ROBO4Q8WZ75 1007 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 UBE2FQ969M7 185 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MSI2Q96DH6 328 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 PGM2Q96G03 612 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 NODALQ96S42 347 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TBX5Q99593 518 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 HOPXQ9BPY8 73 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms