RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HTR2AP28223 471 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 GTF2E2P29084 291 aaKnown RBP14.86□□□□□ -0.03
SNCA-209ENST00000506244 SLC7A2P52569 658 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 TLE4Q04727 773 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 DUSP7Q16829 419 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 C1orf140Q5VVS0 124 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 ZNF613Q6PF04 617 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 PAQR6Q6TCH4 344 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 TUSC5Q8IXB3 177 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 ANKS4BQ8N8V4 417 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 ZNF610Q8N9Z0 462 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 C12orf49Q9H741 205 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 SPAG4Q9NPE6 437 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 CRIM1Q9NZV1 1036 aa14.86□□□□□ -0.03
SNCA-209ENST00000506244 A0A0B4J2E0 115 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 A0A1B0GX12 115 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 LIPT2A6NK58 231 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 M0R3H8 397 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 IMPDH2P12268 514 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 CD247P20963 164 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 SLC16A1P53985 500 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 LIPEQ05469 1076 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 BNIP2Q12982 314 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 OR1Q1Q15612 314 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 OR7A5Q15622 319 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 EXOC3L2Q2M3D2 409 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 LRRC23Q53EV4 343 aaPredicted RBP14.85□□□□□ -0.03
SNCA-209ENST00000506244 C8orf82Q6P1X6 216 aaPredicted RBP14.85□□□□□ -0.03
SNCA-209ENST00000506244 ZNF474Q6S9Z5 364 aaPredicted RBP14.85□□□□□ -0.03
SNCA-209ENST00000506244 TFAP2EQ6VUC0 442 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 GALNT5Q7Z7M9 940 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 SLC15A3Q8IY34 581 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 ZNF295-AS1Q8N0V1 137 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 GPR32P1Q8NGA4 272 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 RNF217Q8TC41 542 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 LZICQ8WZA0 190 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 SLC38A4Q969I6 547 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 CCT8L2Q96SF2 557 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 EPYCQ99645 322 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 MCHR1Q99705 422 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 RSPO3Q9BXY4 272 aaPredicted RBP14.85□□□□□ -0.03
SNCA-209ENST00000506244 ALG2Q9H553 416 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 MCCC2Q9HCC0 563 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 CMTM6Q9NX76 183 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 NDE1Q9NXR1 346 aa14.85□□□□□ -0.03
SNCA-209ENST00000506244 CRYBG3Q68DQ2 2970 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 C16orf97H3BN30 126 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 NME4O00746 187 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 GSTA4O15217 222 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 OR2T1O43869 369 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 SHOX2O60902 331 aaPredicted RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 NPIPB7O75200 414 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 PRF1P14222 555 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 FPR1P21462 350 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 UGT2B10P36537 528 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 PSME3P61289 254 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 H3F3AP84243 136 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 CEACAM7Q14002 265 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 OTUD3Q5T2D3 398 aaPredicted RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 CCDC197Q8NCU1 140 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 OR6T1Q8NGN1 323 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 MFSD8Q8NHS3 518 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 VANGL1Q8TAA9 524 aaPredicted RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 DNAJA3Q96EY1 480 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 DACH2Q96NX9 599 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 KCTD14Q9BQ13 255 aaPredicted RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 POLR2J2Q9GZM3 115 aaKnown RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 POLR2J3Q9H1A7 115 aaKnown RBP14.84□□□□□ -0.03
SNCA-209ENST00000506244 FAM53CQ9NYF3 392 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 ABCD2Q9UBJ2 740 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 TAGLN3Q9UI15 199 aa14.84□□□□□ -0.03
SNCA-209ENST00000506244 SH3D21A4FU49 640 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 AQP7P3A6NL99 342 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 ZNF716A6NP11 495 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 CHP2O43745 196 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 VAMP5O95183 116 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 CNOT4O95628 575 aaKnown RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 EPXP11678 715 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 PPP3CBP16298 524 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 KDELR2P33947 212 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 OR3A2P47893 321 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 MNAT1P51948 309 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 FAM27E3Q08E93 113 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 SNTB1Q13884 538 aaKnown RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 MFSD13AQ14CX5 517 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 FAM69AQ5T7M9 428 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 NUFIP2Q7Z417 695 aaKnown RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 TMEM200AQ86VY9 491 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 ZNF300Q96RE9 604 aaPredicted RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 MED18Q9BUE0 208 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 SF3B5Q9BWJ5 86 aaKnown RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 KLHL4Q9C0H6 718 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 PCDHAC1Q9H158 963 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 OR10A4Q9H209 315 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 ADPRHL2Q9NX46 363 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 C6orf203Q9P0P8 240 aaPredicted RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 ING1Q9UK53 422 aaPredicted RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 USP22Q9UPT9 525 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 NOSIPQ9Y314 301 aaKnown RBP14.83□□□□□ -0.04
SNCA-209ENST00000506244 TESMINQ9Y4I5 508 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms