RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PUSL1Q8N0Z8 303 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OR4C6Q8NH72 309 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CASTOR1Q8WTX7 329 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 THEM6Q8WUY1 208 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SMIM4Q8WVI0 70 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TNFRSF13CQ96RJ3 184 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 LMF1Q96S06 567 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 C7orf50Q9BRJ6 194 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PBX4Q9BYU1 374 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SLC38A1Q9H2H9 487 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 LHX9Q9NQ69 397 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 EXOSC3Q9NQT5 275 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SIDT1Q9NXL6 827 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 KLHL9Q9P2J3 617 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IL36AQ9UHA7 158 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ING1Q9UK53 422 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ACAD8Q9UKU7 415 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TBC1D3BA6NDS4 549 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PEX12O00623 359 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 MAN2B1O00754 1011 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FADS1O60427 444 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CDC123O75794 336 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FGF2P09038 288 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SBK2P0C263 348 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PPP3CBP16298 524 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 BMP8BP34820 402 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 RPL4P36578 427 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 AQP2P41181 271 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 VIPR2P41587 438 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TAS2R38P59533 333 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SNRPNP63162 240 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 NNATQ16517 81 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TCEAL5Q5H9L2 206 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM71Q6P5X7 295 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 GLDNQ6ZMI3 551 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 BMP8AQ7Z5Y6 402 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 METTL3Q86U44 580 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 VN1R2Q8NFZ6 395 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 THAP6Q8TBB0 222 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ZNRF4Q8WWF5 429 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ACOT11Q8WXI4 607 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 DIO2Q92813 273 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ELP4Q96EB1 424 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 UBL7Q96S82 380 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PARP12Q9H0J9 701 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CERS4Q9HA82 394 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 GPN1Q9HCN4 374 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 POLMQ9NP87 494 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 C14orf105Q9NVL8 296 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SLC23A2Q9UGH3 650 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CAMK2AQ9UQM7 478 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 KCNK6Q9Y257 313 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FAM96BQ9Y3D0 163 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 KIF26AQ9ULI4 1882 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 EYSQ5T1H1 3165 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SCN10AQ9Y5Y9 1956 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 A0A1W2PR48 441 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 UNC119BA6NIH7 251 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PRSS44E7EML9 344 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FOXE1O00358 373 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SERPINA3P01011 423 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IGHA1P01876 353 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 HIST1H2ABP04908 130 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CTSLP07711 333 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 KHKP50053 298 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 P2RX1P51575 399 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 C21orf58P58505 322 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FXYD6P3P58550 94 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 EIF2B5Q13144 721 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FAM46CQ5VWP2 391 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 RNLSQ5VYX0 342 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 HIST3H2AQ7L7L0 130 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OVCH2Q7RTZ1 564 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 GRASPQ7Z6J2 395 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 NUDT13Q86X67 352 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CDH26Q8IXH8 852 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 LINC00469Q8N7U9 141 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 C12orf76Q8N812 135 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SUN3Q8TAQ9 357 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ZCCHC10Q8TBK6 192 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IRF7Q92985 503 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 HIST1H2ACQ93077 130 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SLC25A38Q96DW6 304 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PGLYRP3Q96LB9 341 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SLITRK2Q9H156 845 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ANKRD19PQ9H560 264 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IL21Q9HBE4 155 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IL20Q9NYY1 176 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OPN4Q9UHM6 478 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SLC6A5Q9Y345 797 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 OR1A2Q9Y585 309 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TRAV18A0A075B6X5 111 aa7.02□□□□□ -1.29
NEDD9-208ENST00000504387 FAM86C2PA6NEL3 165 aa7.02□□□□□ -1.29
NEDD9-208ENST00000504387 RIIAD1A6NNX1 92 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms