RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PJVKQ0ZLH3 352 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PSG5Q15238 335 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 BOLA3Q53S33 107 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PIGGQ5H8A4 983 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 TIGD3Q6B0B8 471 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 FAM71F2Q6NXP2 309 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PRSS41Q7RTY9 318 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 C6orf120Q7Z4R8 191 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 CLDN19Q8N6F1 224 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 TPRX1Q8N7U7 411 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 OR10G3Q8NGC4 313 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 OR9G1Q8NH87 305 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 C4orf36Q96KX1 117 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 CEP170P1Q96L14 293 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 FOPNLQ96NB1 174 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 RIT2Q99578 217 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 GPA33Q99795 319 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 P2RY13Q9BPV8 354 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 ROGDIQ9GZN7 287 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 TMEM117Q9H0C3 514 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 C20orf85Q9H1P6 137 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 SUDS3Q9H7L9 328 aaPredicted RBP2.17□□□□□ -2.06
CD46-218ENST00000496723 FOLH1BQ9HBA9 442 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 SIGLEC8Q9NYZ4 499 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 ISY1Q9ULR0 285 aaKnown RBP2.17□□□□□ -2.06
CD46-218ENST00000496723 NPIPA1Q9UND3 350 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 PDS5BQ9NTI5 1447 aa2.17□□□□□ -2.06
CD46-218ENST00000496723 A0A0G2JLM5 398 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 ERVV-1B6SEH8 477 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TRDCB7Z8K6 153 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 HIP1O00291 1037 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 AGPAT2O15120 278 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 MAPK13O15264 365 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 ZSCAN12O43309 604 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TPST2O60704 377 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 NOL3O60936 208 aaKnown RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 TM7SF2O76062 418 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 UFL1O94874 794 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 MFN2O95140 757 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 STAMBPO95630 424 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 DIRAS3O95661 229 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 AK1P00568 194 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 PLEKP08567 350 aaPredicted RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 HNRNPA2B1P22626 353 aaKnown RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 PMELP40967 661 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 VDAC2P45880 294 aaPredicted RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 CRISP3P54108 245 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 DLX1P56177 255 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 POLR2FP61218 127 aaKnown RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 SLAQ13239 276 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SHHQ15465 462 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TPD52L1Q16890 204 aaPredicted RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 GGTA1PQ4G0N0 100 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TP53I3Q53FA7 332 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 CTRB2Q6GPI1 263 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 KCNIP4Q6PIL6 250 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 BLOC1S2Q6QNY1 142 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 ZNF621Q6ZSS3 439 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TMEM61Q8N0U2 210 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 NPBQ8NG41 125 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 OR4D9Q8NGE8 314 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 ACER1Q8TDN7 264 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SPRYD4Q8WW59 207 aaPredicted RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 FGF11Q92914 225 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 TIMD4Q96H15 378 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 THUMPD2Q9BTF0 503 aaKnown RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 ZNF416Q9BWM5 594 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SLC17A5Q9NRA2 495 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SLC25A37Q9NYZ2 338 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 DEC1Q9P2X7 70 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 ZNF282Q9UDV7 671 aaPredicted RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 STAP1Q9ULZ2 295 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 AK6Q9Y3D8 172 aaKnown RBP2.16□□□□□ -2.06
CD46-218ENST00000496723 PTCH1Q13635 1447 aa2.16□□□□□ -2.06
CD46-218ENST00000496723 SF3B1O75533 1304 aaKnown RBP eCLIP2.16□□□□□ -2.062e-8■□□□□ 10.1
CD46-218ENST00000496723 FRMPD3Q5JV73 1810 aa2.15□□□□□ -2.06
CD46-218ENST00000496723 A0A0G2JN53 185 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 PPIAL4DF5H284 164 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 MBTPS2O43462 519 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 IDH1O75874 414 aaKnown RBP2.15□□□□□ -2.07
CD46-218ENST00000496723 IFNB1P01574 187 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 HEXBP07686 556 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 NCF1P14598 390 aaPredicted RBP2.15□□□□□ -2.07
CD46-218ENST00000496723 ZNF823P16415 610 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 CALCRP30988 508 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 FMO3P31513 532 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 RFC4P35249 363 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 MDH1P40925 334 aaKnown RBP2.15□□□□□ -2.07
CD46-218ENST00000496723 GLP1RP43220 463 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 RPS14P62263 151 aaKnown RBP2.15□□□□□ -2.07
CD46-218ENST00000496723 SLC25A52Q3SY17 297 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 TPGS2Q68CL5 300 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 MOB3BQ86TA1 216 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 GRAMD2AQ8IUY3 354 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 FADS6Q8N9I5 356 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 CATSPER1Q8NEC5 780 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 OR4K14Q8NGD5 310 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 ZNF596Q8TC21 504 aa2.15□□□□□ -2.07
CD46-218ENST00000496723 RAET1EQ8TD07 263 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms