RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CCDC88CQ9P219 2028 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TRBV5-4A0A0C4DH59 114 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 PPIHO43447 177 aaKnown RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 PCDH8O95206 1070 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 VNN2O95498 520 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ADH1CP00326 375 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 MELTFP08582 738 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 OR1E1P30953 314 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 OPRD1P41143 372 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 PPT1P50897 306 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 NAAAQ02083 359 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 IRF8Q02556 426 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ZNF763Q0D2J5 394 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 PJVKQ0ZLH3 352 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 ACSM3Q53FZ2 586 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TMEM71Q6P5X7 295 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ADCK2Q7Z695 626 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 SCD5Q86SK9 330 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CMTM4Q8IZR5 234 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 GJD3Q8N144 294 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 GTPBP8Q8N3Z3 284 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 TNFAIP8L1Q8WVP5 186 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 NDC1Q9BTX1 674 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ALG8Q9BVK2 526 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 LMAN2LQ9H0V9 348 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 TMEM185BQ9H7F4 350 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 SEMA4GQ9NTN9 838 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ASF1BQ9NVP2 202 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 RCC2Q9P258 522 aaKnown RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 ICKQ9UPZ9 632 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 OR10H1Q9Y4A9 318 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TRAV14DV4A0A0A6YYC5 116 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 GGT3PA6NGU5 568 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 OR2T1O43869 369 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CD1AP06126 327 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TYMPP19971 482 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ATPAF1Q5TC12 328 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 C18orf63Q68DL7 685 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 GRHL2Q6ISB3 625 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 FBXL22Q6P050 247 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 DRAM2Q6UX65 266 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 IQCHQ86VS3 1027 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ARRDC1Q8N5I2 433 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 RASGEF1AQ8N9B8 481 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 OR6N1Q8NGY5 312 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 LKAAEAR1Q8TD35 194 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CCDC107Q8WV48 283 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 SLC25A28Q96A46 364 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 PPCDCQ96CD2 204 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CAMK1GQ96NX5 476 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 MESP1Q9BRJ9 268 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 ZNF471Q9BX82 626 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 SEC61A2Q9H9S3 476 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 CHMP1AQ9HD42 196 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 TREM1Q9NP99 234 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 DZANK1Q9NVP4 752 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 TP53TG5Q9Y2B4 290 aa8.38□□□□□ -1.07
HPS4-217ENST00000496385 SIRT4Q9Y6E7 314 aaPredicted RBP8.38□□□□□ -1.07
HPS4-217ENST00000496385 H7C4K7 107 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PYCARD-AS1I3L0S3 204 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 CCL16O15467 120 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 OIP5O43482 229 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PRAMEF4O60810 478 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ACTL6AO96019 429 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 MPC1LP0DKB6 136 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 C1GALT1C1LP0DN25 315 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 APEHP13798 732 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 LTBRP36941 435 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ACVRL1P37023 503 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 CEACAM6P40199 344 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PTSQ03393 145 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ALKBH1Q13686 389 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 ZNF385BQ569K4 471 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 VWA2Q5GFL6 755 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ATXN7L2Q5T6C5 722 aaPredicted RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 PRAMEF9Q5VWM5 478 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ZDHHC20Q5W0Z9 365 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 C11orf88Q6PI97 169 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 MBOAT1Q6ZNC8 495 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 NDUFAF7Q7L592 441 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 C6orf120Q7Z4R8 191 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 KREMEN2Q8NCW0 462 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SDR9C7Q8NEX9 313 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ZNF671Q8TAW3 534 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 ZNF707Q96C28 371 aaPredicted RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 PRRC1Q96M27 445 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 NRIP2Q9BQI9 281 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PINK1Q9BXM7 581 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PLA2G12AQ9BZM1 189 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 BPIFA1Q9NP55 256 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 MYOZ1Q9NP98 299 aaPredicted RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 ACKR4Q9NPB9 350 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms