RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.63□□□□□ -1.83
GTF3A-208ENST00000493903 GLI3P10071 1580 aa3.63□□□□□ -1.83
GTF3A-208ENST00000493903 ANKRD30AQ9BXX3 1397 aa3.63□□□□□ -1.83
GTF3A-208ENST00000493903 BLMP54132 1417 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SPHKAPQ2M3C7 1700 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SAGE2PA6NJ88 616 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 FOXI3A8MTJ6 420 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 B4DXG7 233 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 E7ESA3 106 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 NDUFS8O00217 210 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 RGS16O15492 202 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 AKR7A2O43488 359 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SNAP91O60641 907 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 PFKFB2O60825 505 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ZFAND5O76080 213 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 LGI1O95970 557 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 GAPDHP04406 335 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 CD55P08174 381 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 HCKP08631 526 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 GCFC2P16383 781 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 POLR2EP19388 210 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 COX5AP20674 150 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 MSR1P21757 451 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 PRDX3P30048 256 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 BMI1P35226 326 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ATP5C1P36542 298 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ELK3P41970 407 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 CSNK1EP49674 416 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 EFNA3P52797 238 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ACLYP53396 1101 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 NDUFV3P56181 108 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 RPL36AP83881 106 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ST3GAL3Q11203 375 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 DNAJC3Q13217 504 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 IL18R1Q13478 541 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 FASTKD3Q14CZ7 662 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 C14orf28Q4W4Y0 310 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 DMRTC1Q5HYR2 192 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SLC8B1Q6J4K2 584 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 KIAA1161Q6NSJ0 714 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SLC47A2Q86VL8 602 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 RNF130Q86XS8 419 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ERI1Q8IV48 349 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 OR2L13Q8N349 312 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 MTURNQ8N3F0 131 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SDR9C7Q8NEX9 313 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 FAM76AQ8TAV0 307 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ACMSDQ8TDX5 336 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SSC4DQ8WTU2 575 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 TCTEX1D2Q8WW35 142 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 TRUB1Q8WWH5 349 aaKnown RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 TOMM40LQ969M1 308 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 FAF2Q96CS3 445 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 C19orf60Q96EN9 201 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 MBOAT4Q96T53 435 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 NANSQ9NR45 359 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 CUTCQ9NTM9 273 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 C20orf96Q9NUD7 363 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 NUDT4Q9NZJ9 180 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 PDP1Q9P0J1 537 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 SENP1Q9P0U3 644 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 THAP10Q9P2Z0 257 aaPredicted RBP3.62□□□□□ -1.83
GTF3A-208ENST00000493903 PHF11Q9UIL8 331 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 PITPNC1Q9UKF7 332 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 TBC1D24Q9ULP9 559 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 ERVW-1Q9UQF0 538 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 USP16Q9Y5T5 823 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 COMMD3-BMI1R4GMX3 469 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 INSRP06213 1382 aa3.62□□□□□ -1.83
GTF3A-208ENST00000493903 MARF1Q9Y4F3 1742 aaKnown RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PXDNQ92626 1479 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 NEXMIFQ5QGS0 1516 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 IGLV4-3A0A075B6K6 122 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 TEX48A0A1B0GUV7 120 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 TRDCB7Z8K6 153 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 OR10H3O60404 316 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 CRYGCP07315 174 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PLEKP08567 350 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 FGF9P31371 208 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 HNRNPH3P31942 346 aaKnown RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ATP4BP51164 291 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 DAP3P51398 398 aaKnown RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 SLC8A3P57103 927 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 KRTAP10-11P60412 298 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 KCNJ2P63252 427 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PUDPQ08623 228 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ASPHQ12797 758 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 CALCOCO2Q13137 446 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 C17orf58Q2M2W7 97 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 VPS26BQ4G0F5 336 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 EIPR1Q53HC9 387 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PLCXD3Q63HM9 321 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF57Q68EA5 555 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ARMCX5Q6P1M9 558 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 FAM199XQ6PEV8 388 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 LRRC74BQ6ZQY2 392 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms