RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ARSGQ96EG1 525 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SLC38A1Q9H2H9 487 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CXXC1Q9P0U4 656 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SCAMP1O15126 338 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 ACTL6AO96019 429 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 KHKP50053 298 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 FOXK2Q01167 660 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 TGM3Q08188 693 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM115Q12893 351 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SNTB1Q13884 538 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PWWP2BQ6NUJ5 590 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 JMJD6Q6NYC1 403 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CCDC116Q8IYX3 515 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PFN4Q8NHR9 129 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PHOSPHO1Q8TCT1 267 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SYNPO2LQ9H987 977 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF629Q9UEG4 869 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 OR5V1Q9UGF6 321 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 KANTRA0A1W2PQU2 76 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 UNC119BA6NIH7 251 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 ACOT7O00154 380 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF749O43361 778 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 OR2T1O43869 369 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 MAKP20794 623 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 MPIP34949 423 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 PLA2G7Q13093 441 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 CRMP1Q14194 572 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 CCL15Q16663 113 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 NDUFAF6Q330K2 333 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 YOD1Q5VVQ6 348 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 RAB12Q6IQ22 244 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 LILRB2Q8N423 598 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 TMIEQ8NEW7 156 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 OR51S1Q8NGJ8 323 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 OR9A1PQ8NGU1 263 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 ARHGDIGQ99819 225 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 ZFP57Q9NU63 452 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 SIDT1Q9NXL6 827 aaKnown RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 PPIL1Q9Y3C6 166 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 SLC22A7Q9Y694 548 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 A0A087WV48 116 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 TTLL8A6PVC2 850 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 SYT5O00445 386 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 ICOSLGO75144 302 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 RD3LP0DJH9 198 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 NR0B1P51843 470 aaKnown RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 SIRPAP78324 504 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 CDK5R1Q15078 307 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 POM121L1PQ3SYA9 428 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 FAM109BQ6ICB4 259 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM173Q86WV6 379 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-210ENST00000493582 CD180Q99467 661 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 PTPN18Q99952 460 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 INPP5EQ9NRR6 644 aa10.78□□□□□ -0.68
HDAC4-210ENST00000493582 PSMD9O00233 223 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 LCMT2O60294 686 aaKnown RBP10.77□□□□□ -0.68
HDAC4-210ENST00000493582 CSF2RBP32927 897 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 GATMP50440 423 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 TAS2R20P59543 309 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 IRF5Q13568 498 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 BEST3Q8N1M1 668 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 ARMC10Q8N2F6 343 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 EID2Q8N6I1 236 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 DVL3Q92997 716 aaPredicted RBP10.77□□□□□ -0.68
HDAC4-210ENST00000493582 OTUB2Q96DC9 234 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.68
HDAC4-210ENST00000493582 BBS4Q96RK4 519 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 VRK1Q99986 396 aaPredicted RBP10.77□□□□□ -0.68
HDAC4-210ENST00000493582 ACSS1Q9NUB1 689 aaPredicted RBP10.77□□□□□ -0.68
HDAC4-210ENST00000493582 LRFN2Q9ULH4 789 aa10.77□□□□□ -0.68
HDAC4-210ENST00000493582 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 IDSB3KWA1 339 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 KCNAB3O43448 404 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 POP7O75817 140 aaKnown RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 SMIM6P0DI80 62 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 EDNRAP25101 427 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 PTAFRP25105 342 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 NAA10P41227 235 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 DUSP2Q05923 314 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 TAF13Q15543 124 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 LY6G6FQ5SQ64 297 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 PRAMEF14Q5SWL7 426 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 CORO6Q6QEF8 472 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 UQCC3Q6UW78 93 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 UNQ6126/PRO20091Q6UXV3 157 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 FAM129CQ86XR2 697 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 GJD3Q8N144 294 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 OR8S1Q8NH09 359 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 OR51A7Q8NH64 312 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 SETD7Q8WTS6 366 aaKnown RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 UBE2E3Q969T4 207 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms