RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 C12orf10Q9HB07 376 aa14.2□□□□□ -0.14
COPS3-210ENST00000492672 MEPEQ9NQ76 525 aaPredicted RBP14.2□□□□□ -0.14
COPS3-210ENST00000492672 SLC5A6Q9Y289 635 aa14.2□□□□□ -0.14
COPS3-210ENST00000492672 FASNP49327 2511 aaKnown RBP14.2□□□□□ -0.14
COPS3-210ENST00000492672 ALPK2Q86TB3 2170 aa14.2□□□□□ -0.14
COPS3-210ENST00000492672 A0A1B0GUH1 482 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 MBD3L4A6NDZ8 208 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 MBD3L3A6NE82 208 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 MBD3L5A6NJ08 208 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 LIPT2A6NK58 231 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SLC22A20A6NK97 555 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 GJE1A6NN92 205 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 ANKRD65E5RJM6 399 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SMAD9O15198 467 aaKnown RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 AKR7A3O95154 331 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 PNMTP11086 282 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 PPP1R8Q12972 351 aaKnown RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 CCNIQ14094 377 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 OR7A5Q15622 319 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 ZNF239Q16600 458 aaKnown RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 SPATA24Q86W54 205 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 ZDHHC21Q8IVQ6 265 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 TMEM99Q8N816 258 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 OR52J3Q8NH60 311 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 MBD3L2Q8NHZ7 208 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 STK35Q8TDR2 534 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SLC25A43Q8WUT9 341 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 CANT1Q8WVQ1 401 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SLCO4A1Q96BD0 722 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 INTS12Q96CB8 462 aaKnown RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 LRGUKQ96M69 825 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 MOGAT1Q96PD6 335 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 ZNF426Q9BUY5 554 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 POTEKPQ9BYX7 375 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 NMNAT1Q9HAN9 279 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 C20orf141Q9NUB4 165 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SELENONQ9NZV5 590 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 STOML1Q9UBI4 398 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 RNF6Q9Y252 685 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 HDGFL3Q9Y3E1 203 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 TESMINQ9Y4I5 508 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 SPIN1Q9Y657 262 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 USP9XQ93008 2570 aaPredicted RBP14.19□□□□□ -0.14
COPS3-210ENST00000492672 HCFC1P51610 2035 aa14.19□□□□□ -0.14
COPS3-210ENST00000492672 TCRBV3S1A0A5B6 114 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 CLEC18AA5D8T8 446 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 FTCDNL1E5RQL4 147 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 BGLAPP02818 100 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 HOXD4P09016 255 aaPredicted RBP14.18□□□□□ -0.14
COPS3-210ENST00000492672 PTGER4P35408 488 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 IDUAP35475 653 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 CLK1P49759 484 aaKnown RBP14.18□□□□□ -0.14
COPS3-210ENST00000492672 RAC3P60763 192 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 MTX3Q5HYI7 312 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 CLEC18BQ6UXF7 455 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 LRRC17Q8N6Y2 441 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 CLEC18CQ8NCF0 446 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 PIK3C3Q8NEB9 887 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 ABHD3Q8WU67 409 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 WNT2BQ93097 391 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 FNDC11Q9BVV2 318 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 IL1RAPQ9NPH3 570 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 VNN3Q9NY84 501 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 KLHL13Q9P2N7 655 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 ING1Q9UK53 422 aaPredicted RBP14.18□□□□□ -0.14
COPS3-210ENST00000492672 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
COPS3-210ENST00000492672 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
COPS3-210ENST00000492672 SPTBN1Q01082 2364 aaKnown RBP14.17□□□□□ -0.14
COPS3-210ENST00000492672 TRBV4-1A0A0J9YWV2 114 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 AQP12BA6NM10 295 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 SYNGR4O95473 234 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 PMS2P2O95744 297 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 LDLRP01130 860 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 FABP3P05413 133 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 RHCEP18577 417 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 FUT1P19526 365 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 SEC23BQ15437 767 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 PDSS1Q5T2R2 415 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
COPS3-210ENST00000492672 TTC33Q6PID6 262 aaPredicted RBP14.17□□□□□ -0.14
COPS3-210ENST00000492672 FCRLAQ7L513 359 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 P4HA3Q7Z4N8 544 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 AQP12AQ8IXF9 295 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 OFCC1Q8IZS5 231 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 KDM8Q8N371 416 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 TMEM43Q9BTV4 400 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 PRRG4Q9BZD6 226 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 RNF122Q9H9V4 155 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 TRAPPC4Q9Y296 219 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 ZNF175Q9Y473 711 aa14.17□□□□□ -0.14
COPS3-210ENST00000492672 TRAV36DV7A0A075B6V5 113 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 A0A087WUU8 490 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 DHRS12A0PJE2 317 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 AGFG2O95081 481 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 RCBTB2O95199 551 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 AHSA1O95433 338 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 CH25HO95992 272 aa14.16□□□□□ -0.14
COPS3-210ENST00000492672 EDNRAP25101 427 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms