RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602		A0A1W2PNR3	127 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	C7orf72	A4D263	438 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TTC36	A6NLP5	189 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	GJE1	A6NN92	205 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TRAF3IP2	O43734	574 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	GPR137B	O60478	399 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	COQ9	O75208	318 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPL33	O75394	65 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	FOXH1	O75593	365 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	NCR1	O76036	304 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	SUPT7L	O94864	414 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF432	O94892	652 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ATP1B1	P05026	303 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ENO1	P06733	434 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CECR9	P0C854	216 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	NTS	P30990	170 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ALDH3B1	P43353	468 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	PKNOX1	P55347	436 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	GPX6	P59796	221 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	KRTAP10-11	P60412	298 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	RAC3	P60763	192 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPS11	P82912	194 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC7A5	Q01650	507 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	POU3F1	Q03052	451 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TRADD	Q15628	312 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	DECR1	Q16698	335 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	HIKESHI	Q53FT3	197 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	BRD3OS	Q6XYD6	125 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602		Q6YL49	198 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	RNF144B	Q7Z419	303 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	TMEM86B	Q8N661	226 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CCDC63	Q8NA47	563 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CEP70	Q8NHQ1	597 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ZFP90	Q8TF47	636 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	MRGPRX4	Q96LA9	322 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	VSTM2L	Q96N03	204 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CDK15	Q96Q40	435 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ATOH8	Q96SQ7	321 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	PRPF18	Q99633	342 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPL37	Q9BZE1	423 aa	Known RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CENPH	Q9H3R5	247 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ACSS3	Q9H6R3	686 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	COQ10B	Q9H8M1	238 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	SEC61A2	Q9H9S3	476 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	PPCS	Q9HAB8	311 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	MIEF1	Q9NQG6	463 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC7A10	Q9NS82	523 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	UBAP1	Q9NZ09	502 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	EMC3	Q9P0I2	261 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF180	Q9UJW8	692 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	RNF11	Q9Y3C5	154 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	CMAHP	Q9Y471	501 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	WIPI2	Q9Y4P8	454 aa		4.56	□□□□□ -1.68
SEC13-219	ENST00000492602	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ISPD	A4D126	451 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	TRAPPC2L	H3BP13	241 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	PDLIM1	O00151	329 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF195	O14628	629 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	EFNA2	O43921	213 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	PLAT	P00750	562 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	F13B	P05160	661 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	MELTF	P08582	738 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ANXA4	P09525	319 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	MYL2	P10916	166 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	NAT2	P11245	290 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF12	P17014	697 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	TSPAN8	P19075	237 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CD33	P20138	364 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	IMPDH1	P20839	514 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ATP5F1	P24539	256 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC7A1	P30825	629 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	BSG	P35613	385 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	PRR5	P85299	388 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CLC	Q05315	142 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	FOXF1	Q12946	379 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	SNTB2	Q13425	540 aa	Known RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	TP53BP2	Q13625	1128 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	E2F2	Q14209	437 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	NSUN5P1	Q3KNT7	163 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	GGTA1P	Q4G0N0	100 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CYP27C1	Q4G0S4	372 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	C1QTNF12	Q5T7M4	302 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	KRT80	Q6KB66	452 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	APOOL	Q6UXV4	268 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	GPRIN3	Q6ZVF9	776 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	COMMD6	Q7Z4G1	85 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CENPL	Q8N0S6	344 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	LYG1	Q8N1E2	194 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	METTL4	Q8N3J2	472 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CCNYL1	Q8N7R7	359 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	GATS	Q8NAP1	163 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF527	Q8NB42	609 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ANKK1	Q8NFD2	765 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602		Q8NFD4	153 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms