RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 HTR2AP28223 471 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 ADSLP30566 484 aaPredicted RBP21.84■■□□□ 1.09
UPF3A-209ENST00000492270 SLC16A1P53985 500 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 KLF10Q13118 480 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 OR7A5Q15622 319 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 ALKBH2Q6NS38 261 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 SPNS3Q6ZMD2 512 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 ZNF100Q8IYN0 542 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 STEAP2Q8NFT2 490 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 SLC35B4Q969S0 331 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 WFDC6Q9BQY6 131 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 SPATA5L1Q9BVQ7 753 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 OR10A4Q9H209 315 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 SAR1AQ9NR31 198 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 ANGPT4Q9Y264 503 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 NOSIPQ9Y314 301 aaKnown RBP21.84■■□□□ 1.09
UPF3A-209ENST00000492270 ITPR3Q14573 2671 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 DSCAMO60469 2012 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.83■■□□□ 1.09
UPF3A-209ENST00000492270 A8MVM7 634 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 EIF1BO60739 113 aaKnown RBP21.83■■□□□ 1.09
UPF3A-209ENST00000492270 AKR7A3O95154 331 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 DMTNQ08495 405 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 ITGADQ13349 1161 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 KEAP1Q14145 624 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 TMEM99Q8N816 258 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 KISS1RQ969F8 398 aaPredicted RBP21.83■■□□□ 1.09
UPF3A-209ENST00000492270 ZNF607Q96SK3 696 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 FOXC2Q99958 501 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 NAA11Q9BSU3 229 aaPredicted RBP21.83■■□□□ 1.09
UPF3A-209ENST00000492270 KAT8Q9H7Z6 458 aaKnown RBP21.83■■□□□ 1.09
UPF3A-209ENST00000492270 PRDM4Q9UKN5 801 aa21.83■■□□□ 1.09
UPF3A-209ENST00000492270 NPIPB7O75200 414 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 OPN1SWP03999 348 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 GPIP06744 558 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 IGHV1-2P23083 117 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 MDH1P40925 334 aaKnown RBP21.82■■□□□ 1.08
UPF3A-209ENST00000492270 PCBP3P57721 371 aaKnown RBP21.82■■□□□ 1.08
UPF3A-209ENST00000492270 P2RY6Q15077 328 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 TRMT5Q32P41 509 aaKnown RBP21.82■■□□□ 1.08
UPF3A-209ENST00000492270 BEX5Q5H9J7 111 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 OTUD3Q5T2D3 398 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-209ENST00000492270 C1orf140Q5VVS0 124 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 PAQR6Q6TCH4 344 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 BHLHA15Q7RTS1 189 aaPredicted RBP21.82■■□□□ 1.08
UPF3A-209ENST00000492270 ARMC8Q8IUR7 673 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 C11orf65Q8NCR3 313 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 HDHD5Q9BXW7 423 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 ADPRHL2Q9NX46 363 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 EDARQ9UNE0 448 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 FLVCR1Q9Y5Y0 555 aa21.82■■□□□ 1.08
UPF3A-209ENST00000492270 FXYD1O00168 92 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 GPR171O14626 319 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 MFN2O95140 757 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 EGR4Q05215 589 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 SLC17A1Q14916 467 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 TAB1Q15750 504 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 NET1Q7Z628 596 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-209ENST00000492270 SMYD1Q8NB12 490 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 OR10A6Q8NH74 314 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 C10orf82Q8WW14 230 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 APH1AQ96BI3 265 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 PLPPR2Q96GM1 343 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 CXXC4Q9H2H0 198 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 PIF1Q9H611 641 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 UBTD1Q9HAC8 227 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 KLHL14Q9P2G3 628 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 RPS6KB2Q9UBS0 482 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 ROS1P08922 2347 aa21.81■■□□□ 1.08
UPF3A-209ENST00000492270 A0A1B0GWA3 101 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 PRORSD1PA6NEY8 169 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 ELOA3DA6NLF2 546 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-209ENST00000492270 PLAUP00749 431 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 CD53P19397 219 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 COX5AP20674 150 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 GZMMP51124 257 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 RGS8P57771 180 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-209ENST00000492270 RBBP4Q09028 425 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 ELOA3BQ3SY89 546 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 RABL3Q5HYI8 236 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 REP15Q6BDI9 236 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 NANOGP8Q6NSW7 305 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 CASP12Q6UXS9 341 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 SNX32Q86XE0 403 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 UBE2J2Q8N2K1 259 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 ELOA3Q8NG57 546 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 OR52E4Q8NGH9 312 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 MBD6Q96DN6 1003 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 ZNF317Q96PQ6 595 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-209ENST00000492270 PTDSS2Q9BVG9 487 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 TAPBPLQ9BX59 468 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 NANOGQ9H9S0 305 aa21.8■■□□□ 1.08
UPF3A-209ENST00000492270 VPS13CQ709C8 3753 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 AQP7P3A6NL99 342 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 MRASO14807 208 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 TPST2O60704 377 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 MRPL33O75394 65 aaKnown RBP21.79■■□□□ 1.08
UPF3A-209ENST00000492270 SERPINB7O75635 380 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 P2RY4P51582 365 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 FOXG1P55316 489 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms