RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 NUDT15Q9NV35 164 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SIDT1Q9NXL6 827 aaKnown RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 RARRES3Q9UL19 164 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ANGPT4Q9Y264 503 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF780BQ9Y6R6 833 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SCN2AQ99250 2005 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 TRAV6A0A075B6T7 132 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 IRGMA1A4Y4 181 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 FGF17O60258 216 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SULT1A3P0DMM9 295 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SULT1A4P0DMN0 295 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 EFNB1P98172 346 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 STK11Q15831 433 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 NTRK2Q16620 822 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 DCST1Q5T197 706 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 CFAP77Q6ZQR2 320 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ASB18Q6ZVZ8 466 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 PRICKLE2Q7Z3G6 844 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 MARCH9Q86YJ5 346 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 IQCF1Q8N6M8 205 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR2T4Q8NH00 348 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR51Q1Q8NH59 317 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SUN3Q8TAQ9 357 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR5P2Q8WZ92 322 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF681Q96N22 645 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SEMA3GQ9NS98 782 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 GLS2Q9UI32 602 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SCP2D1Q9UJQ7 156 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 TEX13CA0A0J9YWL9 993 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 OR10H3O60404 316 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ACP2P11117 423 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 AHCYP23526 432 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 NTSP30990 170 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-221ENST00000488111 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-221ENST00000488111 FRKP42685 505 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-221ENST00000488111 GCGRP47871 477 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SKP1P63208 163 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 RAB40BQ12829 278 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ZMYND11Q15326 602 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 AGBL5Q8NDL9 886 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 DEFB124Q8NES8 71 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 NEIL3Q8TAT5 605 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 HSD17B8Q92506 261 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 LRR1Q96L50 414 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 CDC6Q99741 560 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 SDHAF2Q9NX18 166 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 ZMAT5Q9UDW3 170 aaKnown RBP12.61□□□□□ -0.39
COPS7B-221ENST00000488111 EXOSC1Q9Y3B2 195 aaKnown RBP12.61□□□□□ -0.39
COPS7B-221ENST00000488111 NPTNQ9Y639 398 aa12.61□□□□□ -0.39
COPS7B-221ENST00000488111 H0YIG0 161 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 GPR171O14626 319 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 SCRG1O75711 98 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 WDPCPO95876 746 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 RNH1P13489 461 aaKnown RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 CSNK2A2P19784 350 aaPredicted RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 DSTNP60981 165 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 BTG2P78543 158 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 TRIP6Q15654 476 aaKnown RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 LTB4RQ15722 352 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 TUSC1Q2TAM9 212 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 HACD4Q5VWC8 232 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 CHMP1BQ7LBR1 199 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 SZRD1Q7Z422 152 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 SLC30A8Q8IWU4 369 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 OR5M3Q8NGP4 307 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 OR9A2Q8NGT5 310 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF764Q96H86 408 aaPredicted RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 FUZQ9BT04 418 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 LDAHQ9H6V9 325 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
COPS7B-221ENST00000488111 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
COPS7B-221ENST00000488111 G3V3Q6 166 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 M0R233 179 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 GABRPO00591 440 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 SEMA7AO75326 666 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 LIMS3P0CW19 117 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 LIMS4P0CW20 117 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 COL5A1P20908 1838 aaPredicted RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 RFX3P48380 749 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 TRA2AQ13595 282 aaKnown RBP eCLIP12.59□□□□□ -0.39
COPS7B-221ENST00000488111 SPDYE7PQ495Y7 208 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 NHLRC3Q5JS37 347 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 BHLHB9Q6PI77 547 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ASCL5Q7RTU5 278 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 PPP1R3BQ86XI6 285 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 ZFP41Q8N8Y5 198 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 UXS1Q8NBZ7 420 aa12.59□□□□□ -0.39
COPS7B-221ENST00000488111 OR8D4Q8NGM9 314 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms