RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 POMT2Q9UKY4 750 aa11.42□□□□□ -0.58
HSPG2-211ENST00000486901 MED12Q93074 2177 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 PYCARD-AS1I3L0S3 204 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 PDCD5O14737 125 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 CEBPBP17676 345 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 GABRA3P34903 492 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 FRKP42685 505 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 B3GNTL1Q67FW5 361 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 TMEM88Q6PEY1 159 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SFTPA2Q8IWL1 248 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 CDK20Q8IZL9 346 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 MARC2Q969Z3 335 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 HSPA12BQ96MM6 686 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SARGQ9BW04 601 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ACTRT3Q9BYD9 372 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 MRPS2Q9Y399 296 aaKnown RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SLC22A23A1A5C7 686 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 OR5K3A6NET4 321 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 MOSPD3O75425 235 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 NGFRP08138 427 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 OR8G3PP0DMU2 310 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 LIN54Q6MZP7 749 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 LINC00471Q8N535 108 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 OR10AC1Q8NH08 325 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 OR8D1Q8WZ84 308 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 RSPRY1Q96DX4 576 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 TOE1Q96GM8 510 aaKnown RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SDF2Q99470 211 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ZNF230Q9UIE0 474 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 CELSR3Q9NYQ7 3312 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 TEX51A0A1B0GUA7 166 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 BLOC1S5-TXNDC5H3BN57 136 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 PIN1P1O15428 100 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 EML2O95834 649 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 PRNPP04156 253 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ADH5P11766 374 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 CCL5P13501 91 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 NFYAP23511 347 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ERVK-25P63136 954 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SORDQ00796 357 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ZNF234Q14588 700 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 TMPRSS12Q86WS5 348 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 GID4Q8IVV7 300 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 CCL4L1Q8NHW4 92 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 PPA2Q9H2U2 334 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 SRA1Q9HD15 236 aaKnown RBP11.41□□□□□ -0.58
HSPG2-211ENST00000486901 C2orf42Q9NWW7 574 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 FBXL3Q9UKT7 428 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 BAIAP2Q9UQB8 552 aa11.41□□□□□ -0.58
HSPG2-211ENST00000486901 ZDBF2Q9HCK1 2354 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MPDZO75970 2070 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 A0A1W2PP55 124 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 PLPP2O43688 288 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 CDK2P24941 298 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 PTH2RP49190 550 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 CENPAP49450 140 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 CCR4P51679 360 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 GPALPP1Q8IXQ4 340 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 TNFAIP8L1Q8WVP5 186 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 RADILQ96JH8 1075 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MENTQ9BUN1 341 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 PIPOXQ9P0Z9 390 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 OR10H1Q9Y4A9 318 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 NCOR1O75376 2440 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
HSPG2-211ENST00000486901 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 PRR32B1ATL7 298 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MCIDASD6RGH6 385 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MYOGP15173 224 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
HSPG2-211ENST00000486901 NDUFS1P28331 727 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 NANOS3P60323 173 aaKnown RBP11.4□□□□□ -0.58
HSPG2-211ENST00000486901 METRNLQ641Q3 311 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MRGPREQ86SM8 312 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 SMARCD2Q92925 531 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 GIMAP5Q96F15 307 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 UBL7Q96S82 380 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-211ENST00000486901 C19orf43Q9BQ61 176 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 TRPV4Q9HBA0 871 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 IKZF2Q9UKS7 526 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
HSPG2-211ENST00000486901 TRAPPC13A5PLN9 417 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 CCSO14618 274 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 EFEMP2O95967 443 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 NMBP08949 121 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 ZNF3P17036 446 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 MMP15P51511 669 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 H2BFSP57053 126 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 SIRPAP78324 504 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 RIN1Q13671 783 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 C4orf46Q504U0 113 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 LRFN4Q6PJG9 635 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 RANBP3LQ86VV4 465 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-211ENST00000486901 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 SLC25A28Q96A46 364 aa11.39□□□□□ -0.59
HSPG2-211ENST00000486901 SEC22AQ96IW7 307 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms