RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ZNF613Q6PF04 617 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 C6orf89Q6UWU4 347 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 FKBP9P1Q75LS8 142 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 LUZP2Q86TE4 346 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 TSPYL5Q86VY4 417 aaPredicted RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 STK35Q8TDR2 534 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 ADAMTS16Q8TE57 1224 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 GMPPAQ96IJ6 420 aaPredicted RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 TAPBPLQ9BX59 468 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 POTEKPQ9BYX7 375 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 C12orf10Q9HB07 376 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 ZNF629Q9UEG4 869 aaPredicted RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 CD300AQ9UGN4 299 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 RPS6KA6Q9UK32 745 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 SLC7A7Q9UM01 511 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 KLF2Q9Y5W3 355 aaPredicted RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 SNX13Q9Y5W8 968 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 IGKV1D-42A0A075B6H8 117 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 LIPT2A6NK58 231 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 C19orf84I3L1E1 186 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 CHP2O43745 196 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 TNFSF13O75888 250 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 PRKD3O94806 890 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 GPIP06744 558 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 FPR1P21462 350 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 KIR2DL2P43627 348 aaPredicted RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 RPS5P46782 204 aaKnown RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 TAS2R41P59536 307 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 SLC35A1P78382 337 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 RASGEF1BQ0VAM2 473 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 RNPS1Q15287 305 aaKnown RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 TMEM201Q5SNT2 666 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 GTF2IRD2BQ6EKJ0 949 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 FAM214BQ7L5A3 538 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 GTF2IRD2Q86UP8 949 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 SLC43A2Q8N370 569 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 GEMIN6Q8WXD5 167 aaKnown RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 SLC38A4Q969I6 547 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 SLC25A36Q96CQ1 311 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 KTI12Q96EK9 354 aaPredicted RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 SLC41A3Q96GZ6 507 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 NSMCE2Q96MF7 247 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 PCDHAC1Q9H158 963 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 TAS2R1Q9NYW7 299 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 C6orf203Q9P0P8 240 aaPredicted RBP10.57□□□□□ -0.72
HPS4-214ENST00000485842 KLHL13Q9P2N7 655 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 TRAPPC4Q9Y296 219 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 HCFC1P51610 2035 aa10.57□□□□□ -0.72
HPS4-214ENST00000485842 A0A087WUJ7 227 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 ZNF814B7Z6K7 855 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 KPNA4O00629 521 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 DNPH1O43598 174 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 CYTIPO60759 359 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 RAMP1O60894 148 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 NPIPB7O75200 414 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 AKR7A3O95154 331 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 THY1P04216 161 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 IFNW1P05000 195 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 CBLP22681 906 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 GTF2E2P29084 291 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 AGTR1P30556 359 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 UQCRC1P31930 480 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 YAP1P46937 504 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 EGR4Q05215 589 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 TFF3Q07654 80 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 PIN1Q13526 163 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 GUSBP1Q15486 140 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 SPATS1Q496A3 300 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 OTUD3Q5T2D3 398 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 SWT1Q5T5J6 900 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 ABLIM2Q6H8Q1 611 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 GDF7Q7Z4P5 450 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 CCDC103Q8IW40 242 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 TUSC5Q8IXB3 177 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 ARHGAP24Q8N264 748 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 C10orf53Q8N6V4 93 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 FAM86B1Q8N7N1 296 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 PIGXQ8TBF5 258 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 ZNF775Q96BV0 537 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 STARD4Q96DR4 205 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 CLPTM1LQ96KA5 538 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 ZNF300Q96RE9 604 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 PSD2Q9BQI7 771 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 NAA11Q9BSU3 229 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 PTDSS2Q9BVG9 487 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 OPN3Q9H1Y3 402 aaPredicted RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 PIGMQ9H3S5 423 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 C12orf49Q9H741 205 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 GLRX2Q9NS18 164 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 DCAF13Q9NV06 445 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 KLHL9Q9P2J3 617 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 PRPF19Q9UMS4 504 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 PROCRQ9UNN8 238 aa10.56□□□□□ -0.72
HPS4-214ENST00000485842 SAMD4AQ9UPU9 718 aaKnown RBP10.56□□□□□ -0.72
HPS4-214ENST00000485842 UTP20O75691 2785 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms