RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PGGHGQ32M88 737 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM176BQ3YBM2 270 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 FAM209BQ5JX69 171 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 CCNJQ5T5M9 372 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 ANKRD26P1Q6NSI1 321 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 CLEC2AQ6UVW9 174 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 ZYG11AQ6WRX3 759 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 Q6ZT83 130 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 NUFIP2Q7Z417 695 aaKnown RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 DTX2Q86UW9 622 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 PHC2Q8IXK0 858 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 RNF152Q8N8N0 203 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 SLC16A11Q8NCK7 471 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 MNS1Q8NEH6 495 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 BHLHE22Q8NFJ8 381 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 KBTBD8Q8NFY9 601 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 POC1BQ8TC44 478 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 FAM110BQ8TC76 370 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 ZFP90Q8TF47 636 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 NEUROG1Q92886 237 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 CIDECQ96AQ7 238 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 GIMAP5Q96F15 307 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 RADILQ96JH8 1075 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 EGLN2Q96KS0 407 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 STACQ99469 402 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 NPAS1Q99742 590 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 CCT7Q99832 543 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 TRAF4Q9BUZ4 470 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 SRXN1Q9BYN0 137 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 TRIM2Q9C040 744 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 WDR12Q9GZL7 423 aaKnown RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 HOXD1Q9GZZ0 328 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 REEP4Q9H6H4 257 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 PPCSQ9HAB8 311 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 ACSS1Q9NUB1 689 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 ZCCHC3Q9NUD5 404 aaKnown RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 C1orf109Q9NX04 203 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 CISD1Q9NZ45 108 aaKnown RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 PSMC3IPQ9P2W1 217 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-207ENST00000483407 POU2F3Q9UKI9 436 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 DSCAMO60469 2012 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 TLN2Q9Y4G6 2542 aa5.19□□□□□ -1.58
CSDE1-207ENST00000483407 DPRXA6NFQ7 191 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 PRSS29PA6NIE9 313 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 NPIPB8E9PQR5 432 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ABCD4O14678 606 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TBX19O60806 448 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 NDUFS7O75251 213 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 LYZL6O75951 148 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 NTN1O95631 604 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CHEK2O96017 543 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 KRT16P08779 473 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 GGT1P19440 569 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 SHC1P29353 583 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 RPL3P39023 403 aaKnown RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 FRKP42685 505 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ASMTP46597 345 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 OR3A2P47893 321 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CCT5P48643 541 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 C21orf58P58505 322 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF117Q03924 483 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 RASGEF1BQ0VAM2 473 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 LASP1Q14847 261 aaKnown RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 KIAA0040Q15053 153 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 RAB35Q15286 201 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CD226Q15762 336 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CCDC153Q494R4 210 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TIMM23BQ5SRD1 257 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 C6orf52Q5T4I8 152 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM108Q6UXF1 575 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 LRIG3Q6UXM1 1119 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 DNM1P46Q6ZS02 220 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TRMT10CQ7L0Y3 403 aaKnown RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 R3HCC1LQ7Z5L2 792 aaKnown RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 P2RY8Q86VZ1 359 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF100Q8IYN0 542 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 FBXL14Q8N1E6 418 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TMCO5AQ8N6Q1 288 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF614Q8N883 585 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CCDC63Q8NA47 563 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ATP6V1C2Q8NEY4 427 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TOR1AIP2Q8NFQ8 470 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 OR10H5Q8NGA6 315 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 NMD3Q96D46 503 aaKnown RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 MTERF3Q96E29 417 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 OTUB1Q96FW1 271 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TSSK3Q96PN8 268 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 PSD2Q9BQI7 771 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 MRI1Q9BV20 369 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 BEX2Q9BXY8 128 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 AMBRA1Q9C0C7 1298 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 PIGUQ9H490 435 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 COQ10BQ9H8M1 238 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 MSL2Q9HCI7 577 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 DUSP22Q9NRW4 184 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CBLN4Q9NTU7 201 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 GIN1Q9NXP7 522 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 LPAR3Q9UBY5 353 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms