RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 SMNDC1O75940 238 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTSA-206ENST00000480961 LYPD3O95274 346 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 PMS2P2O95744 297 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 IL18BPO95998 194 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 PNMTP11086 282 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 HSD17B1P14061 328 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 RPS5P46782 204 aaKnown RBP18.16■□□□□ 0.5
CTSA-206ENST00000480961 YAP1P46937 504 aaKnown RBP18.16■□□□□ 0.5
CTSA-206ENST00000480961 EGR4Q05215 589 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 TFF3Q07654 80 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 SP5Q6BEB4 398 aaPredicted RBP18.16■□□□□ 0.5
CTSA-206ENST00000480961 C6orf89Q6UWU4 347 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 CBLL1Q75N03 491 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 TUSC5Q8IXB3 177 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 LZICQ8WZA0 190 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 SLC38A4Q969I6 547 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 OPN3Q9H1Y3 402 aaPredicted RBP18.16■□□□□ 0.5
CTSA-206ENST00000480961 NPDC1Q9NQX5 325 aaPredicted RBP18.16■□□□□ 0.5
CTSA-206ENST00000480961 TAS2R1Q9NYW7 299 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 TRAPPC4Q9Y296 219 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 SNX13Q9Y5W8 968 aa18.16■□□□□ 0.5
CTSA-206ENST00000480961 LIPT2A6NK58 231 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 SS18L1O75177 396 aaPredicted RBP18.15■□□□□ 0.5
CTSA-206ENST00000480961 NPIPB7O75200 414 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 GMNNO75496 209 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 PDE5AO76074 875 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 PRKD3O94806 890 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 MAP2K6P52564 334 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 CTBP2P56545 445 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 SLC35A1P78382 337 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 SNTB1Q13884 538 aaKnown RBP18.15■□□□□ 0.5
CTSA-206ENST00000480961 GUSBP1Q15486 140 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 ZNF613Q6PF04 617 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 WDR88Q6ZMY6 472 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 FKBP9P1Q75LS8 142 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 FAM214BQ7L5A3 538 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 ADAMTS16Q8TE57 1224 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 TAAR8Q969N4 342 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 SLC25A36Q96CQ1 311 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 ZHX1-C8orf76Q96EF9 292 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 GMPPAQ96IJ6 420 aaPredicted RBP18.15■□□□□ 0.5
CTSA-206ENST00000480961 HSH2DQ96JZ2 352 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 CLPTM1LQ96KA5 538 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 C12orf10Q9HB07 376 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 SLC7A7Q9UM01 511 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 V9GYQ6 96 aa18.15■□□□□ 0.5
CTSA-206ENST00000480961 A0A087WUJ7 227 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 TRAPPC13A5PLN9 417 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 CYTIPO60759 359 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 AKR7A3O95154 331 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 AHSA1O95433 338 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 CRHP06850 196 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 CBLP22681 906 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 UQCRC1P31930 480 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 TAS2R41P59536 307 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 RASGEF1BQ0VAM2 473 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 PIN1Q13526 163 aaPredicted RBP18.14■□□□□ 0.49
CTSA-206ENST00000480961 GTF2IRD2BQ6EKJ0 949 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 NUFIP2Q7Z417 695 aaKnown RBP18.14■□□□□ 0.49
CTSA-206ENST00000480961 GDF7Q7Z4P5 450 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 GTF2IRD2Q86UP8 949 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 FAM86B1Q8N7N1 296 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 SLC41A3Q96GZ6 507 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 ZNF300Q96RE9 604 aaPredicted RBP18.14■□□□□ 0.49
CTSA-206ENST00000480961 PTDSS2Q9BVG9 487 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 AMBRA1Q9C0C7 1298 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 C12orf49Q9H741 205 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 ING1Q9UK53 422 aaPredicted RBP18.14■□□□□ 0.49
CTSA-206ENST00000480961 EMC9Q9Y3B6 208 aa18.14■□□□□ 0.49
CTSA-206ENST00000480961 SETXQ7Z333 2677 aaKnown RBP18.14■□□□□ 0.49
CTSA-206ENST00000480961 ARPC2O15144 300 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 GPIP06744 558 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 FUT4P22083 530 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 AGTR1P30556 359 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 ASCL1P50553 236 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 RNPS1Q15287 305 aaKnown RBP18.13■□□□□ 0.49
CTSA-206ENST00000480961 IFI44LQ53G44 452 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 SLC43A2Q8N370 569 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 TMEM99Q8N816 258 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 ZNF610Q8N9Z0 462 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 PSD2Q9BQI7 771 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 TAPBPLQ9BX59 468 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 DCAF13Q9NV06 445 aaKnown RBP18.13■□□□□ 0.49
CTSA-206ENST00000480961 JKAMPQ9P055 326 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 MAGEL2Q9UJ55 1249 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 RIMS3Q9UJD0 308 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 CENPEQ02224 2701 aa18.13■□□□□ 0.49
CTSA-206ENST00000480961 J3KTA2 159 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 CHP2O43745 196 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 CGAP01215 116 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 H3F3AP84243 136 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 FXNQ16595 210 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 TMEM201Q5SNT2 666 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 OTUD3Q5T2D3 398 aaPredicted RBP18.12■□□□□ 0.49
CTSA-206ENST00000480961 ZNF787Q6DD87 383 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 CYP2R1Q6VVX0 501 aa18.12■□□□□ 0.49
CTSA-206ENST00000480961 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.12■□□□□ 0.49
CTSA-206ENST00000480961 GEMIN6Q8WXD5 167 aaKnown RBP18.12■□□□□ 0.49
CTSA-206ENST00000480961 NAA11Q9BSU3 229 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms