RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 THNSL2Q86YJ6 484 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LACC1Q8IV20 430 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC44A5Q8NCS7 719 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OR8U1Q8NH10 309 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MMABQ96EY8 250 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC25A44Q96H78 314 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 AQP10Q96PS8 301 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SDCBP2Q9H190 292 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MAGIXQ9H6Y5 334 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OR6C2Q9NZP2 312 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 GNG12Q9UBI6 72 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ADGRB3O60242 1522 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 DCDC2BA2VCK2 349 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CLDN24A6NM45 220 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RGS13O14921 159 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 AP1G1O43747 822 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 B4GALT2O60909 372 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SNAP29O95721 258 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ARAFP10398 606 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CASP3P42574 277 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CTSCP53634 463 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MC2RQ01718 297 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PLEKHS1Q5SXH7 462 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 NHLRC1Q6VVB1 395 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LYG2Q86SG7 212 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RASD2Q96D21 266 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TIMP4Q99727 224 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PTPN18Q99952 460 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 QPCTLQ9NXS2 382 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ADGRB2O60241 1585 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 DOCK9Q9BZ29 2069 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TRBV2A0A0J9YWF9 115 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 WASH4PA8MWX3 477 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 DDAH2O95865 285 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CSTAP01040 98 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ALDOCP09972 364 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 FAM163BP0C2L3 166 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PEX2P28328 305 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CSNK1A1P48729 337 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RPL30P62888 115 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 MTF1Q14872 753 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PON2Q15165 354 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TMEM211Q6ICI0 200 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 KIAA1211LQ6NV74 962 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SSX9Q7RTT3 188 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF679Q8IYX0 411 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OR5AK2Q8NH90 309 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ELP4Q96EB1 424 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SPATC1LQ9H0A9 340 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 DCSTAMPQ9H295 470 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SIRPGQ9P1W8 387 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CD300AQ9UGN4 299 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 STRAPQ9Y3F4 350 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 INSL6Q9Y581 213 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 NCANO14594 1321 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 KMT2EQ8IZD2 1858 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PRAMEF25A6NGN4 478 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PRAMEF26H0Y7S4 382 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SELENOFO60613 162 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SH3BGRLO75368 114 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LINC00032P0C843 101 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TAL1P17542 331 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 GABRR2P28476 465 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OPRD1P41143 372 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ASCL1P50553 236 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RPS25P62851 125 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 ERVK-25P63136 954 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MKRN4PQ13434 485 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 CYP1B1Q16678 543 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 FAM124AQ86V42 546 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LRRC25Q8N386 305 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 OR10V1Q8NGI7 309 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OR1L3Q8NH93 324 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SGTBQ96EQ0 304 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 DPH3Q96FX2 82 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TAAR6Q96RI8 345 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TPPP3Q9BW30 176 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MRPS2Q9Y399 296 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 ETV7Q9Y603 341 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 A0A0A6YYC8 382 aaPredicted RBP5.09□□□□□ -1.59
USF3-202ENST00000478658 KCNU1A8MYU2 1149 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 PRSS44E7EML9 344 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 I3L1I5 382 aaPredicted RBP5.09□□□□□ -1.59
USF3-202ENST00000478658 DENRO43583 198 aaKnown RBP5.09□□□□□ -1.59
USF3-202ENST00000478658 KLRC4O43908 158 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 SLC25A5P05141 298 aaKnown RBP5.09□□□□□ -1.59
USF3-202ENST00000478658 RPS14P62263 151 aaKnown RBP5.09□□□□□ -1.59
USF3-202ENST00000478658 C3orf38Q5JPI3 329 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 OR2A2Q6IF42 318 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 UNC5AQ6ZN44 842 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 PLPPR4Q7Z2D5 763 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 H2BFWTQ7Z2G1 175 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 GPR26Q8NDV2 337 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 OR2K2Q8NGT1 345 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 TMED6Q8WW62 240 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 GNRHR2Q96P88 292 aa5.09□□□□□ -1.59
USF3-202ENST00000478658 MRPL37Q9BZE1 423 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms