RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CPSF4LA6NMK7 179 aaKnown RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CYTIPO60759 359 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 PRKD3O94806 890 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 PLGP00747 810 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 C8BP07358 591 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 COX6B1P14854 86 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 NCK1P16333 377 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 FPR1P21462 350 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 KDELR2P33947 212 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 NTF4P34130 210 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CPOXP36551 454 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 OR1E2P47887 323 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CLK1P49759 484 aaKnown RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CDH12P55289 794 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 OR2B6P58173 313 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 FAM27E3Q08E93 113 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CEACAM7Q14002 265 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 OR7A5Q15622 319 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 ALG10BQ5I7T1 473 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 ENTPD8Q5MY95 495 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 ABLIM2Q6H8Q1 611 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 C6orf89Q6UWU4 347 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 WDR88Q6ZMY6 472 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 MCEMP1Q8IX19 187 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 RNF148Q8N7C7 305 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 CCDC197Q8NCU1 140 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 FAM156AQ8NDB6 213 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 BHLHE22Q8NFJ8 381 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 DDIT4LQ96D03 193 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 KTI12Q96EK9 354 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 PTDSS2Q9BVG9 487 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 RBM24Q9BX46 236 aaKnown RBP8.63□□□□□ -1.03
HDAC3-208ENST00000476739 TRIM2Q9C040 744 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 PIGMQ9H3S5 423 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 C12orf49Q9H741 205 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 TMEM181Q9P2C4 612 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 SLC13A4Q9UKG4 626 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 PROCRQ9UNN8 238 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 TRAPPC4Q9Y296 219 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 SH3GLB1Q9Y371 365 aa8.63□□□□□ -1.03
HDAC3-208ENST00000476739 A0A087WUJ7 227 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 LIPT2A6NK58 231 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF716A6NP11 495 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 A8MVM7 634 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 CXCR6O00574 342 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 MSTNO14793 375 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 HNRNPRO43390 633 aaKnown RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 AKR7A3O95154 331 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 LYPD3O95274 346 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 YES1P07947 543 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 T-ENOLP0DO92 83 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 CD8BP10966 210 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 FUT4P22083 530 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 PAX7P23759 505 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 IDUAP35475 653 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 P2RY4P51582 365 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 MAP2K6P52564 334 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 CTBP2P56545 445 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 NCALDP61601 193 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 SLC35A1P78382 337 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 H3F3AP84243 136 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RASGEF1BQ0VAM2 473 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 DYNC1I2Q13409 638 aaKnown RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 TMED1Q13445 227 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RNPS1Q15287 305 aaKnown RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 CYBRD1Q53TN4 286 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 C1orf140Q5VVS0 124 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ULK3Q6PHR2 472 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 VTCN1Q7Z7D3 282 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RANBP3LQ86VV4 465 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 CARM1Q86X55 608 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 TMEM99Q8N816 258 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RBM15BQ8NDT2 890 aaKnown RBP8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 OR6K3Q8NGY3 331 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 LZICQ8WZA0 190 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 SLC38A4Q969I6 547 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 TPD52L3Q96J77 140 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF559Q9BR84 538 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 POTEKPQ9BYX7 375 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 BCO1Q9HAY6 547 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 TMEM27Q9HBJ8 222 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 SPAG4Q9NPE6 437 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 PLSCR4Q9NRQ2 329 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 GLRX2Q9NS18 164 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 ADA2Q9NZK5 511 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 RPS6KB2Q9UBS0 482 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 SEC14L4Q9UDX3 406 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 EGFL7Q9UHF1 273 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms