RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PWWP2BQ6NUJ5 590 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 C11orf88Q6PI97 169 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 CBLN2Q8IUK8 224 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ARL14Q8N4G2 192 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 BOLLQ8N9W6 283 aaKnown RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM185AQ8NFB2 350 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 OR56A1Q8NGH5 318 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 TNFAIP8L1Q8WVP5 186 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF223Q9UK11 482 aaPredicted RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 TRBV2A0A0J9YWF9 115 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ABHD14A-ACY1A0A1B0GW23 586 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 OLFM2O95897 454 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 GLAP06280 429 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 GP1BAP07359 652 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 PVALBP20472 110 aaPredicted RBP17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ASTLQ6HA08 431 aaPredicted RBP17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 LRIG1Q96JA1 1093 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ADAT1Q9BUB4 502 aaKnown RBP17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 WDR13Q9H1Z4 485 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ADAM29Q9UKF5 820 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC35A3Q9Y2D2 325 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ACOD1A6NK06 481 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 LINC00587B1AMM8 73 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF879B4DU55 563 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 STARP49675 285 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 ARFIP1P53367 373 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 FAM209BQ5JX69 171 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 C9orf64Q5T6V5 341 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 OR13C2Q8NGS9 318 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 EPHX3Q9H6B9 360 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM138Q9NPI0 162 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 OR5V1Q9UGF6 321 aa17.15■□□□□ 0.34
ECHDC1-214ENST00000474289 TRAV14DV4A0A0A6YYC5 116 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 RFPL4AA6NLU0 287 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 RIIAD1A6NNX1 92 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 RFPL4AL1F8VTS6 287 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 NRG2O14511 850 aaPredicted RBP17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 OR1F1O43749 312 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 MC3RP41968 323 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 GUCA2BQ16661 112 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 ARSIQ5FYB1 569 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 FAM46CQ5VWP2 391 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 HAVCR1Q96D42 359 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 PELI2Q9HAT8 420 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 IL21Q9HBE4 155 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 HAO2Q9NYQ3 351 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 CALML5Q9NZT1 146 aa17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF443Q9Y2A4 671 aaPredicted RBP17.14■□□□□ 0.33
ECHDC1-214ENST00000474289 ELFN1P0C7U0 828 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 RFC3P40938 356 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 MAGEB1P43366 347 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 TAS2R20P59543 309 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 PRR5P85299 388 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 REEP5Q00765 189 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 TNFRSF17Q02223 184 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 MPPED2Q15777 294 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 MICBQ29980 383 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 CCDC157Q569K6 752 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF547Q8IVP9 402 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 NUP43Q8NFH3 380 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 OR1M1Q8NGA1 313 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 OR4C16Q8NGL9 310 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 RAD51AP1Q96B01 352 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 AICDAQ9GZX7 198 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 PRDM9Q9NQV7 894 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 WASH3PC4AMC7 463 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 K7ESM1 405 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 GRM6O15303 877 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 EFEMP2O95967 443 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 STATHP02808 62 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 RAB40ALP0C0E4 278 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 EDNRAP25101 427 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF136P52737 540 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 UBE2IP63279 158 aaKnown RBP17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 UNQ9370/PRO34162Q6UXP9 181 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF546Q86UE3 836 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 SVBPQ8N300 66 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 RAB40AQ8WXH6 277 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 CACYBPQ9HB71 228 aaKnown RBP17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 OBSL1O75147 1896 aa17.13■□□□□ 0.33
ECHDC1-214ENST00000474289 TRAV27A0A087WT01 109 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 A0A1B0GTQ1 180 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 LCMT2O60294 686 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 RCBTB2O95199 551 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF3P17036 446 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 ADCYAP1P18509 176 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 RORAP35398 523 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 TRA2BP62995 288 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 STX4Q12846 297 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 PCGF3Q3KNV8 242 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 TPGS2Q68CL5 300 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 FRRS1Q6ZNA5 592 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 ZMYND19Q96E35 227 aaPredicted RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 MS4A4EQ96PG1 132 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 CMSS1Q9BQ75 279 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms