RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SRXN1Q9BYN0 137 aa16.11■□□□□ 0.17
SNX4-204ENST00000473417 OR11A1Q9GZK7 315 aa16.11■□□□□ 0.17
SNX4-204ENST00000473417 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
SNX4-204ENST00000473417 KLHL28Q9NXS3 571 aa16.11■□□□□ 0.17
SNX4-204ENST00000473417 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
SNX4-204ENST00000473417 AP3M1Q9Y2T2 418 aa16.11■□□□□ 0.17
SNX4-204ENST00000473417 SPIN1Q9Y657 262 aaPredicted RBP16.11■□□□□ 0.17
SNX4-204ENST00000473417 NDUFAB1O14561 156 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 RGS8P57771 180 aaPredicted RBP16.1■□□□□ 0.17
SNX4-204ENST00000473417 VEZF1Q14119 521 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 FAM91A1Q658Y4 838 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 FAM214BQ7L5A3 538 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 MICU2Q8IYU8 434 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 GPR32P1Q8NGA4 272 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 SLC25A43Q8WUT9 341 aaPredicted RBP16.1■□□□□ 0.17
SNX4-204ENST00000473417 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 TIGARQ9NQ88 270 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 ELOVL5Q9NYP7 299 aa16.1■□□□□ 0.17
SNX4-204ENST00000473417 ELOVL7A1L3X0 281 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 M0R3H8 397 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 LGI1O95970 557 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 CD247P20963 164 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 CXCR1P25024 350 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 HTR2AP28223 471 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 UGT2B10P36537 528 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 KCNJ5P48544 419 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 CRYBA2P53672 197 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 OR52E4Q8NGH9 312 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 BCAS4Q8TDM0 211 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 CPNE4Q96A23 557 aaPredicted RBP16.09■□□□□ 0.17
SNX4-204ENST00000473417 ARL5BQ96KC2 179 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 RPS6KB2Q9UBS0 482 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 CLEC4AQ9UMR7 237 aa16.09■□□□□ 0.17
SNX4-204ENST00000473417 IGHV3-15A0A0B4J1V0 119 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 SULT2B1O00204 365 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 CASKO14936 926 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 POU2F1P14859 743 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 KLK2P20151 261 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 ENPP1P22413 925 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 GSK3BP49841 420 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 DIO1P49895 249 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 RAC3P60763 192 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 NCALDP61601 193 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 BNIP2Q12982 314 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 KEAP1Q14145 624 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 ZNF239Q16600 458 aaKnown RBP16.08■□□□□ 0.16
SNX4-204ENST00000473417 DEFB113Q30KQ7 82 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 LRRC23Q53EV4 343 aaPredicted RBP16.08■□□□□ 0.16
SNX4-204ENST00000473417 VANGL1Q8TAA9 524 aaPredicted RBP16.08■□□□□ 0.16
SNX4-204ENST00000473417 C3orf49Q96BT1 292 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 DDIT4LQ96D03 193 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 WFIKKN1Q96NZ8 548 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 ARHGDIGQ99819 225 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 ALG2Q9H553 416 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 ADA2Q9NZK5 511 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 PROCRQ9UNN8 238 aa16.08■□□□□ 0.16
SNX4-204ENST00000473417 A0A1B0GWA3 101 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 ZC3H12DA2A288 527 aaKnown RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 SIAH2O43255 324 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 ZNF208O43345 1280 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 TPST2O60704 377 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 SS18L1O75177 396 aaPredicted RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 PLGP00747 810 aaPredicted RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 FESP07332 822 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 C8BP07358 591 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 CRYGSP22914 178 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 FKBP2P26885 142 aaKnown RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 KDELR2P33947 212 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 MXRA7P84157 204 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 SLC25A3Q00325 362 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 KRT72Q14CN4 511 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 ATG4DQ86TL0 474 aaPredicted RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 ZNF610Q8N9Z0 462 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 OR6K3Q8NGY3 331 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 RASSF5Q8WWW0 418 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 GMPPAQ96IJ6 420 aaPredicted RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 TRIM2Q9C040 744 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 SPAG4Q9NPE6 437 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 ABCD2Q9UBJ2 740 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 TESQ9UGI8 421 aaKnown RBP16.07■□□□□ 0.16
SNX4-204ENST00000473417 EMC9Q9Y3B6 208 aa16.07■□□□□ 0.16
SNX4-204ENST00000473417 FREM1Q5H8C1 2179 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 DSCAMO60469 2012 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 DEFB108AA8MXU0 73 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 GSTA4O15217 222 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 IFNA14P01570 189 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 CD53P19397 219 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
SNX4-204ENST00000473417 MAP2K6P52564 334 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 OR2B6P58173 313 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 CSNK2A1P68400 391 aaPredicted RBP16.06■□□□□ 0.16
SNX4-204ENST00000473417 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
SNX4-204ENST00000473417 OR1Q1Q15612 314 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 NRF1Q16656 503 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 FCRLAQ7L513 359 aa16.06■□□□□ 0.16
SNX4-204ENST00000473417 RANBP3LQ86VV4 465 aaPredicted RBP16.06■□□□□ 0.16
SNX4-204ENST00000473417 RBM45Q8IUH3 476 aaKnown RBP16.06■□□□□ 0.16
SNX4-204ENST00000473417 RNF148Q8N7C7 305 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms