RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PAQR6Q6TCH4 344 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 SLC38A5Q8WUX1 472 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
VTI1A-203ENST00000472892 ITCHQ96J02 903 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 OR52B2Q96RD2 323 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 TRAF4Q9BUZ4 470 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-203ENST00000472892 RMND5AQ9H871 391 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 TPT1P8Q9HAU6 139 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 P2RX2Q9UBL9 471 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 FLVCR1Q9Y5Y0 555 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 SLC25A15Q9Y619 301 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 CCT8L1PA6NM43 557 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 ABCD4O14678 606 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 UBDO15205 165 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 ANP32DO95626 131 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 ITGA5P08648 1049 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 GKN3PP0CG01 181 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 CXCR1P25024 350 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 PTAFRP25105 342 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 CDKN1AP38936 164 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 POLR2JP52435 117 aaKnown RBP13.45□□□□□ -0.26
VTI1A-203ENST00000472892 CRISP3P54108 245 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 FOXG1P55316 489 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-203ENST00000472892 FAPQ12884 760 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 LIN52Q52LA3 116 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF836Q6ZNA1 936 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 DTX2Q86UW9 622 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-203ENST00000472892 VRK2Q86Y07 508 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 OR52N5Q8NH56 324 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 AMBRA1Q9C0C7 1298 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 THUMPD1Q9NXG2 353 aaKnown RBP13.45□□□□□ -0.26
VTI1A-203ENST00000472892 MGAT4BQ9UQ53 548 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 CADP27708 2225 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 CSPG4Q6UVK1 2322 aa13.45□□□□□ -0.26
VTI1A-203ENST00000472892 A0A0G2JPF8 293 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 LIPT2A6NK58 231 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 HNRNPCL2B2RXH8 293 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 HNRNPCL3B7ZW38 293 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 HNRNPCL1O60812 293 aaKnown RBP13.44□□□□□ -0.26
VTI1A-203ENST00000472892 IGHV4-39P01824 125 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 GPIP06744 558 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 HNRNPCL4P0DMR1 293 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 DSTNP60981 165 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 CEACAM7Q14002 265 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 GTDC1Q4AE62 458 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 WBP2NLQ6ICG8 309 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 EPGNQ6UW88 154 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 DNM1P46Q6ZS02 220 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 MIER2Q8N344 545 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 CLIP4Q8N3C7 705 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 ZIC4Q8N9L1 334 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 WDR31Q8NA23 367 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 OR9I1Q8NGQ6 314 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 VPS33AQ96AX1 596 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM45BQ96B21 275 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 SF3B5Q9BWJ5 86 aaKnown RBP13.44□□□□□ -0.26
VTI1A-203ENST00000472892 SLCO5A1Q9H2Y9 848 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 PIF1Q9H611 641 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 SLC7A10Q9NS82 523 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF232Q9UNY5 417 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF443Q9Y2A4 671 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-203ENST00000472892 CHST2Q9Y4C5 530 aa13.44□□□□□ -0.26
VTI1A-203ENST00000472892 FAM234BA2RU67 622 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 E7EQL1 145 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 ERLIN1O75477 346 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 BCHEP06276 602 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 CD40P25942 277 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 PCSK6P29122 969 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 ZNF83P51522 516 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 CDH11P55287 796 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 COPZ1P61923 177 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 VEZF1Q14119 521 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 LARS2Q15031 903 aaKnown RBP13.43□□□□□ -0.26
VTI1A-203ENST00000472892 OTUD3Q5T2D3 398 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-203ENST00000472892 C1QTNF12Q5T7M4 302 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 AGAP6Q5VW22 663 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 CASP12Q6UXS9 341 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 TMEM99Q8N816 258 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-203ENST00000472892 GTF2H4Q92759 462 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 AURKBQ96GD4 344 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-203ENST00000472892 SPATA9Q9BWV2 254 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 PAIP1Q9H074 479 aaKnown RBP13.43□□□□□ -0.26
VTI1A-203ENST00000472892 ALG2Q9H553 416 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 BCL2L10Q9HD36 194 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 UPB1Q9UBR1 384 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 PCDHB14Q9Y5E9 798 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 TLN2Q9Y4G6 2542 aa13.43□□□□□ -0.26
VTI1A-203ENST00000472892 HIVEP2P31629 2446 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms