RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PROCRQ9UNN8 238 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 CXCR6O00574 342 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 SMNDC1O75940 238 aaKnown RBP eCLIP13.63□□□□□ -0.23
SDC3-203ENST00000471567 GPIP06744 558 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 YES1P07947 543 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 AGTR1P30556 359 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 UQCRC1P31930 480 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 SELENOWP63302 87 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 H3F3AP84243 136 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 RASGEF1BQ0VAM2 473 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 BNIP2Q12982 314 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 NPTX1Q15818 432 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 LRRC23Q53EV4 343 aaPredicted RBP13.63□□□□□ -0.23
SDC3-203ENST00000471567 TMEM201Q5SNT2 666 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 C1orf140Q5VVS0 124 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
SDC3-203ENST00000471567 LUZP2Q86TE4 346 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 KIF18BQ86Y91 864 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 LZICQ8WZA0 190 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 PSD2Q9BQI7 771 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 NAA11Q9BSU3 229 aaPredicted RBP13.63□□□□□ -0.23
SDC3-203ENST00000471567 RBM24Q9BX46 236 aaKnown RBP13.63□□□□□ -0.23
SDC3-203ENST00000471567 ADPRHL2Q9NX46 363 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 ADA2Q9NZK5 511 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
SDC3-203ENST00000471567 CLEC4AQ9UMR7 237 aa13.63□□□□□ -0.23
SDC3-203ENST00000471567 IGKV3D-15A0A087WSY6 115 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 A0A087WUJ7 227 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 IGHV3-15A0A0B4J1V0 119 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 LIPT2A6NK58 231 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 AHSA1O95433 338 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 FPR1P21462 350 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 MXRA7P84157 204 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 SORDQ00796 357 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 CEACAM7Q14002 265 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 ENTPD8Q5MY95 495 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
SDC3-203ENST00000471567 ZNF787Q6DD87 383 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 ABLIM2Q6H8Q1 611 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 PAQR6Q6TCH4 344 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 CARM1Q86X55 608 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 MFSD8Q8NHS3 518 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
SDC3-203ENST00000471567 TAPBPLQ9BX59 468 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 POLR2J2Q9GZM3 115 aaKnown RBP13.62□□□□□ -0.23
SDC3-203ENST00000471567 POLR2J3Q9H1A7 115 aaKnown RBP13.62□□□□□ -0.23
SDC3-203ENST00000471567 ELOVL5Q9NYP7 299 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 ING1Q9UK53 422 aaPredicted RBP13.62□□□□□ -0.23
SDC3-203ENST00000471567 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
SDC3-203ENST00000471567 TRAPPC13A5PLN9 417 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 GPR171O14626 319 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 CHP2O43745 196 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 OR2T1O43869 369 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 HSD17B1P14061 328 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 GGT1P19440 569 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 KLK2P20151 261 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 CALB2P22676 271 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 SLC16A1P53985 500 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 CDH12P55289 794 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 SLC25A3Q00325 362 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 EGR4Q05215 589 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 OR7A5Q15622 319 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 ZNF474Q6S9Z5 364 aaPredicted RBP13.61□□□□□ -0.23
SDC3-203ENST00000471567 LINC00114Q6XXX2 140 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 CBLL1Q75N03 491 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 STK32CQ86UX6 486 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
SDC3-203ENST00000471567 ZNF610Q8N9Z0 462 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 OR6S1Q8NH40 331 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 MARVELD3Q96A59 401 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 DNAJA3Q96EY1 480 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 CDRT15Q96T59 188 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 TMEM43Q9BTV4 400 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 OPN3Q9H1Y3 402 aaPredicted RBP13.61□□□□□ -0.23
SDC3-203ENST00000471567 FANCFQ9NPI8 374 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 GALNT8Q9NY28 637 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 EMC3Q9P0I2 261 aa13.61□□□□□ -0.23
SDC3-203ENST00000471567 PKDREJQ9NTG1 2253 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 IGKV1D-42A0A075B6H8 117 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 TRAV36DV7A0A075B6V5 113 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 CPSF4LA6NMK7 179 aaKnown RBP13.6□□□□□ -0.23
SDC3-203ENST00000471567 ZNF716A6NP11 495 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 B2RBV5 119 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 FZD7O75084 574 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 GMNNO75496 209 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 CD79BP40259 229 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 FXNQ16595 210 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 GLYATQ6IB77 296 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 DEFB107AQ8IZN7 70 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 RNF217Q8TC41 542 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 FAM162AQ96A26 154 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
SDC3-203ENST00000471567 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms