RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 BNIP2Q12982 314 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 VEZF1Q14119 521 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 NPTX1Q15818 432 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 NRF1Q16656 503 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PPP4R4Q6NUP7 873 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 ZNF474Q6S9Z5 364 aaPredicted RBP11.03□□□□□ -0.64
LINC00888-202ENST00000471496 C6orf89Q6UWU4 347 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 FCRLAQ7L513 359 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PATL1Q86TB9 770 aaKnown RBP11.03□□□□□ -0.64
LINC00888-202ENST00000471496 LUZP2Q86TE4 346 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 ANKS4BQ8N8V4 417 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
LINC00888-202ENST00000471496 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PSD2Q9BQI7 771 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PRRG4Q9BZD6 226 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 OPN3Q9H1Y3 402 aaPredicted RBP11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PLSCR4Q9NRQ2 329 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 SPIN1Q9Y657 262 aaPredicted RBP11.03□□□□□ -0.64
LINC00888-202ENST00000471496 PDZD2O15018 2839 aa11.03□□□□□ -0.64
LINC00888-202ENST00000471496 A0A1B0GWA3 101 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 M0R3H8 397 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 SULT2B1O00204 365 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 CYTIPO60759 359 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 RAMP1O60894 148 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 FAM107AO95990 144 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 FESP07332 822 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 C8BP07358 591 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 UQCRC1P31930 480 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 NUDT2P50583 147 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 SLC7A2P52569 658 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 COPZ1P61923 177 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 EGR4Q05215 589 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 INTS11Q5TA45 600 aaKnown RBP11.02□□□□□ -0.65
LINC00888-202ENST00000471496 FAM91A1Q658Y4 838 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ERICH5Q6P6B1 374 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ARPINQ7Z6K5 226 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 TSPYL5Q86VY4 417 aaPredicted RBP11.02□□□□□ -0.65
LINC00888-202ENST00000471496 MICU2Q8IYU8 434 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ZNF610Q8N9Z0 462 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 OR6T1Q8NGN1 323 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 OR6K3Q8NGY3 331 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 HOPXQ9BPY8 73 aaPredicted RBP11.02□□□□□ -0.65
LINC00888-202ENST00000471496 TEX15Q9BXT5 2789 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 POTEKPQ9BYX7 375 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 TMEM181Q9P2C4 612 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ABCD2Q9UBJ2 740 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 TESQ9UGI8 421 aaKnown RBP11.02□□□□□ -0.65
LINC00888-202ENST00000471496 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 TRAPPC4Q9Y296 219 aa11.02□□□□□ -0.65
LINC00888-202ENST00000471496 MAST4O15021 2626 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 ZNF716A6NP11 495 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 DNPH1O43598 174 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.651e-7■□□□□ 11.3
LINC00888-202ENST00000471496 PRKD3O94806 890 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 EPXP11678 715 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 CXCR1P25024 350 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 CPA2P48052 419 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 RGS8P57771 180 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 CSNK2A1P68400 391 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 LIPEQ05469 1076 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 RNPS1Q15287 305 aaKnown RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 RBM45Q8IUH3 476 aaKnown RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 TUSC5Q8IXB3 177 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 SLC43A2Q8N370 569 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 OR2T12Q8NG77 320 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 OR52E4Q8NGH9 312 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 LRRC37BQ96QE4 947 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 ZNF559Q9BR84 538 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 RBM24Q9BX46 236 aaKnown RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 GP6Q9HCN6 339 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 KLHL13Q9P2N7 655 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 FOXD3Q9UJU5 478 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-202ENST00000471496 NAV2Q8IVL1 2488 aa11.01□□□□□ -0.65
LINC00888-202ENST00000471496 IGKV1D-42A0A075B6H8 117 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 A0A0B4J2E0 115 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 A0A1B0GX12 115 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 ELOVL7A1L3X0 281 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 LIPT2A6NK58 231 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 A8MVM7 634 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 FZD7O75084 574 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 LYPD3O95274 346 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 PLGP00747 810 aaPredicted RBP11□□□□□ -0.65
LINC00888-202ENST00000471496 THY1P04216 161 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 FPR1P21462 350 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 EDNRAP25101 427 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 CCKARP32238 428 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 KDELR2P33947 212 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 NTF4P34130 210 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 PCYT1AP49585 367 aa11□□□□□ -0.65
LINC00888-202ENST00000471496 GSK3BP49841 420 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms