RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DOK1Q99704 481 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 ERP44Q9BS26 406 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 PIGUQ9H490 435 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF665Q9H7R5 613 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 RRAGDQ9NQL2 400 aaPredicted RBP5.93□□□□□ -1.46
HDAC1-204ENST00000471488 TAS2R7Q9NYW3 318 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 UBAP1Q9NZ09 502 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 GRHL1Q9NZI5 618 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM181Q9P2C4 612 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 DUSP13Q9UII6 198 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 MKLN1Q9UL63 735 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF281Q9Y2X9 895 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 UTP11Q9Y3A2 253 aaKnown RBP5.93□□□□□ -1.46
HDAC1-204ENST00000471488 FLVCR1Q9Y5Y0 555 aa5.93□□□□□ -1.46
HDAC1-204ENST00000471488 TRIM49D1C9J1S8 452 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 PDLIM1O00151 329 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 RAD51CO43502 376 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SYNGR3O43761 229 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 AKR7A3O95154 331 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 PMS2P2O95744 297 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 GPANK1O95872 356 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 CD79AP11912 226 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ACHEP22303 614 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 PRTN3P24158 256 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 APOBEC1P41238 236 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 MAP3K8P41279 467 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 IDH2P48735 452 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 CCT3P49368 545 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 PKNOX1P55347 436 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 RPL38P63173 70 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 IL13RA1P78552 427 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 LCP2Q13094 533 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SKP2Q13309 424 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 OR7A5Q15622 319 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 NKPD1Q17RQ9 610 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ATP6AP1LQ52LC2 224 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SLC25A53Q5H9E4 307 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM225Q6GV28 225 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ZCCHC12Q6PEW1 402 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 BRICD5Q6PL45 260 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SPATC1Q76KD6 591 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 EIF3MQ7L2H7 374 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 C16orf62Q7Z3J2 963 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 CREG2Q8IUH2 290 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 RIBC1Q8N443 379 aaPredicted RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 POMGNT2Q8NAT1 580 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ICA1LQ8NDH6 482 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 NUP37Q8NFH4 326 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 MGARPQ8TDB4 240 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 YIPF5Q969M3 257 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SLC25A28Q96A46 364 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 RAB39BQ96DA2 213 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF385AQ96PM9 386 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 STACQ99469 402 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ACTRT3Q9BYD9 372 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 TMPRSS13Q9BYE2 586 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 MRPL37Q9BZE1 423 aaKnown RBP5.92□□□□□ -1.46
HDAC1-204ENST00000471488 LAT2Q9GZY6 243 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 OR51B6Q9H340 312 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SERHL2Q9H4I8 314 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 REEP4Q9H6H4 257 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 DUSP22Q9NRW4 184 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ACER3Q9NUN7 267 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ADPRHL2Q9NX46 363 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 ARMCX1Q9P291 453 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 MID2Q9UJV3 735 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 STK38LQ9Y2H1 464 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 HDGFL3Q9Y3E1 203 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 SAR1BQ9Y6B6 198 aa5.92□□□□□ -1.46
HDAC1-204ENST00000471488 IGHV3OR16-10A0A075B7F0 116 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMED7-TICAM2A0A0A6YYA0 188 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 IGHV2OR16-5A0A0B4J2B6 119 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CENPVL1A0A0U1RR11 272 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM129A0AVI4 362 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM72A0PK05 275 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 FAM187AA6NFU0 413 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 M0QZ24 198 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ANKRD28O15084 1053 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 EIF1BO60739 113 aaKnown RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 RSL1D1O76021 490 aaKnown RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 KNG1P01042 644 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 KRT16P08779 473 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 SBK3P0C264 359 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 BCKDHAP12694 445 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 SDC1P18827 310 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 IMPDH1P20839 514 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ATP5F1P24539 256 aaPredicted RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 SELENOPP49908 381 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 KHKP50053 298 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 SLC16A1P53985 500 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 GNG11P61952 73 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 LMO4P61968 165 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CCL8P80075 99 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ARF1P84077 181 aaKnown RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 GALK2Q01415 458 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ROR2Q01974 943 aaKnown RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CAV1Q03135 178 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 PIGFQ07326 219 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CEACAM7Q14002 265 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 SLC17A1Q14916 467 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms