RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 HIPK4Q8NE63 616 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 RNF128Q8TEB7 428 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 HDHD5Q9BXW7 423 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 ADAM19Q9H013 955 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 NANOGQ9H9S0 305 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 ARMCX1Q9P291 453 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 ANGPT4Q9Y264 503 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 CAPN7Q9Y6W3 813 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 MRASO14807 208 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 SMAD9O15198 467 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 SIAH2O43255 324 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 TPST1O60507 370 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 SERPINB7O75635 380 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 FESP07332 822 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 PRKAR1BP31321 381 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 CCKARP32238 428 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 GYS2P54840 703 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 RBBP4Q09028 425 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 BNIP2Q12982 314 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 TRMT5Q32P41 509 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 Q5PR19 223 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 ANKRD34AQ69YU3 496 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 REP15Q6BDI9 236 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 MTDHQ86UE4 582 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 PTOV1Q86YD1 416 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 ZHX1-C8orf76Q96EF9 292 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 RSPO3Q9BXY4 272 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 GSX2Q9BZM3 304 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 KAT8Q9H7Z6 458 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 UBTD1Q9HAC8 227 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 KLHL9Q9P2J3 617 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 RPS6KB2Q9UBS0 482 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 PRDM4Q9UKN5 801 aa12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 RAI1Q7Z5J4 1906 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-211ENST00000467553 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 M0QX08 132 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 ZNF208O43345 1280 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 CYTIPO60759 359 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 CCDC22O60826 627 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 PMS2P2O95744 297 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 RABL3Q5HYI8 236 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 DHRS4L2Q6PKH6 230 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 ARMC8Q8IUR7 673 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 CCDC103Q8IW40 242 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 POU5F2Q8N7G0 328 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 PCYOX1LQ8NBM8 494 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 SH3GL1Q99961 368 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 ECSITQ9BQ95 431 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 PSD2Q9BQI7 771 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 TACO1Q9BSH4 297 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 KLHL13Q9P2N7 655 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 TRAPPC4Q9Y296 219 aa12.48□□□□□ -0.41
CCHCR1-211ENST00000467553 PRORSD1PA6NEY8 169 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 BBIP1A8MTZ0 92 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 MFN2O95140 757 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 NPPAP01160 153 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 IMPDH2P12268 514 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 MAP2K6P52564 334 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC35A1P78382 337 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 DMTNQ08495 405 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 CEACAM7Q14002 265 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 COQ5Q5HYK3 327 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 STAC2Q6ZMT1 411 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 SSX8Q7RTT4 187 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 CPLX4Q7Z7G2 160 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 ZC3HAV1LQ96H79 300 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 ZNF300Q96RE9 604 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 POTEKPQ9BYX7 375 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 CXorf56Q9H5V9 222 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 FREM1Q5H8C1 2179 aa12.47□□□□□ -0.41
CCHCR1-211ENST00000467553 A8MVM7 634 aa12.46□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC22A2O15244 555 aa12.46□□□□□ -0.41
CCHCR1-211ENST00000467553 KLF4O43474 513 aa12.46□□□□□ -0.41
CCHCR1-211ENST00000467553 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
CCHCR1-211ENST00000467553 OPN1SWP03999 348 aa12.46□□□□□ -0.41
CCHCR1-211ENST00000467553 COX4I1P13073 169 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms