RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 FBXW5Q969U6 566 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 CCDC28BQ9BUN5 200 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 SPATA9Q9BWV2 254 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 GSX2Q9BZM3 304 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 A4GALTQ9NPC4 353 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 INTS9Q9NV88 658 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 ASB6Q9NWX5 421 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC25A37Q9NYZ2 338 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 ZNF232Q9UNY5 417 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 LAMP3Q9UQV4 416 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 IFT52Q9Y366 437 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 CHST2Q9Y4C5 530 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 FLVCR1Q9Y5Y0 555 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 A0A1W2PR80 420 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 DPRXA6NFQ7 191 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 H7C1Q1 480 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 SMAD7O15105 426 aaKnown RBP17■□□□□ 0.31
CCHCR1-210ENST00000464012 AKR7A3O95154 331 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 CNOT4O95628 575 aaKnown RBP17■□□□□ 0.31
CCHCR1-210ENST00000464012 GPIP06744 558 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 MRPL19P49406 292 aaKnown RBP17■□□□□ 0.31
CCHCR1-210ENST00000464012 FOXG1P55316 489 aaPredicted RBP17■□□□□ 0.31
CCHCR1-210ENST00000464012 H3F3AP84243 136 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 HOXC5Q00444 222 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 FADDQ13158 208 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 AGKQ53H12 422 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 PAGE3Q5JUK9 113 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 TIMM23BQ5SRD1 257 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 C9orf135Q5VTT2 229 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 BLOC1S3Q6QNY0 202 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 MSRB3Q8IXL7 192 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 CIARTQ8N365 385 aaPredicted RBP17■□□□□ 0.31
CCHCR1-210ENST00000464012 TMEM99Q8N816 258 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 OR52E4Q8NGH9 312 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 NFKBIDQ8NI38 313 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 BBS10Q8TAM1 723 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 IGFBPL1Q8WX77 278 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 ARMC7Q9H6L4 198 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 ADPRHL2Q9NX46 363 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 NPAP1Q9NZP6 1156 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 SLAMF8Q9P0V8 285 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC9A8Q9Y2E8 581 aa17■□□□□ 0.31
CCHCR1-210ENST00000464012 MTORP42345 2549 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 TRIM64A6NGJ6 449 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 TRIM64BA6NI03 449 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 OR5H1A6NKK0 313 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 MAP2K6P52564 334 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 RPS4XP62701 263 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC17A1Q14916 467 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 LRIF1Q5T3J3 769 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 GCNT6Q5T4J0 391 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 PAQR6Q6TCH4 344 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 HDXQ7Z353 690 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 TAPBPLQ9BX59 468 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 VAPAQ9P0L0 249 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 UPB1Q9UBR1 384 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 MALT1Q9UDY8 824 aa16.99■□□□□ 0.31
CCHCR1-210ENST00000464012 SETD2Q9BYW2 2564 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 A0A1W2PP18 115 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 LIPT2A6NK58 231 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 A8MVM7 634 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 HMGB1P1B2RPK0 211 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 PGM3O95394 542 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 ITGA5P08648 1049 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 BMP2P12643 396 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 ATP5J2P56134 94 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 SQLEQ14534 574 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 ZSWIM7Q19AV6 140 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 ZNF672Q499Z4 452 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 PRSS57Q6UWY2 283 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 CLEC9AQ6UXN8 241 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 GPAT4Q86UL3 456 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 C10orf111Q8N326 155 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 C3orf49Q96BT1 292 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 POM121Q96HA1 1249 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 ARGLU1Q9NWB6 273 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 TAS2R16Q9NYV7 291 aa16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-210ENST00000464012 CADP27708 2225 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 USF3Q68DE3 2245 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 ABCD4O14678 606 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 SOD3P08294 240 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 ARAFP10398 606 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 ZNF83P51522 516 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 C1orf140Q5VVS0 124 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 PRAMEF8Q5VWM4 474 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 PRAMEF7Q5VXH5 474 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 P2RY8Q86VZ1 359 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 COX4I2Q96KJ9 171 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 BDH2Q9BUT1 245 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 BCL2L10Q9HD36 194 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC7A10Q9NS82 523 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 RPS6KB2Q9UBS0 482 aa16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 MAGED1Q9Y5V3 778 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-210ENST00000464012 AQP7P3A6NL99 342 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 PPIBP23284 216 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 CDKN1AP38936 164 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 ATP4BP51164 291 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms