RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ELOA3DA6NLF2 546 aaPredicted RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 A8MVM7 634 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 EIF1BO60739 113 aaKnown RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 OPN1SWP03999 348 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 THBDP07204 575 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 IMPDH2P12268 514 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 FPR1P21462 350 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 CEACAM7Q14002 265 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 OR7A5Q15622 319 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 COQ5Q5HYK3 327 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 ALKBH2Q6NS38 261 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 C22orf34Q6ZV56 151 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 PTOV1Q86YD1 416 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 CCDC103Q8IW40 242 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 SLC30A8Q8IWU4 369 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 SMYD1Q8NB12 490 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 PCYOX1LQ8NBM8 494 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 ELOA3Q8NG57 546 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 C3orf49Q96BT1 292 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 ZNF317Q96PQ6 595 aaPredicted RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 FAM107BQ9H098 131 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 OR10A4Q9H209 315 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 PIF1Q9H611 641 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 KAT8Q9H7Z6 458 aaKnown RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 ARMCX1Q9P291 453 aa13.65□□□□□ -0.22
VARS-219ENST00000461328 ING1Q9UK53 422 aaPredicted RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 NOSIPQ9Y314 301 aaKnown RBP13.65□□□□□ -0.22
VARS-219ENST00000461328 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 GPR171O14626 319 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 TPST1O60507 370 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 KRT34O76011 436 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 AHSA1O95433 338 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 ADAP00813 363 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 CD53P19397 219 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 PSMB1P20618 241 aaKnown RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 ADSLP30566 484 aaPredicted RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 PCGF2P35227 344 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 OR3A2P47893 321 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 PDK3Q15120 406 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 GLIPR1L2Q4G1C9 344 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 BEX5Q5H9J7 111 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 OTUD3Q5T2D3 398 aaPredicted RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 C1orf140Q5VVS0 124 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 ATG4DQ86TL0 474 aaPredicted RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 WFDC8Q8IUA0 241 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 TGIF2LYQ8IUE0 185 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 STEAP2Q8NFT2 490 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 KISS1RQ969F8 398 aaPredicted RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 LRRC58Q96CX6 371 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 ECSITQ9BQ95 431 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 HDHD5Q9BXW7 423 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 POTEKPQ9BYX7 375 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 TRIM2Q9C040 744 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 UBTD1Q9HAC8 227 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 GID8Q9NWU2 228 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 ADPRHL2Q9NX46 363 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
VARS-219ENST00000461328 PRSS50Q9UI38 385 aa13.64□□□□□ -0.23
VARS-219ENST00000461328 IGKV3D-15A0A087WSY6 115 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
VARS-219ENST00000461328 LIPT2A6NK58 231 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 ZNF716A6NP11 495 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 ZNF814B7Z6K7 855 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 SLC22A2O15244 555 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 CCDC22O60826 627 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 RAMP1O60894 148 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 AKR7A3O95154 331 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 CD99P14209 185 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 HTR2AP28223 471 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 DMTNQ08495 405 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 TSC22D1Q15714 1073 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 RABL3Q5HYI8 236 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 ALG10BQ5I7T1 473 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 NANOGP8Q6NSW7 305 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
VARS-219ENST00000461328 PATL1Q86TB9 770 aaKnown RBP13.63□□□□□ -0.23
VARS-219ENST00000461328 COMTD1Q86VU5 262 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 GABRG1Q8N1C3 465 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 OR8J3Q8NGG0 315 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 S100PBPQ96BU1 408 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
VARS-219ENST00000461328 NANOGQ9H9S0 305 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 TMEM27Q9HBJ8 222 aa13.63□□□□□ -0.23
VARS-219ENST00000461328 BEX4Q9NWD9 120 aaPredicted RBP13.63□□□□□ -0.23
VARS-219ENST00000461328 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 A0A1B0GWA3 101 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 TMEM229AB2RXF0 380 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms